FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004955708

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955708
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences126961
Sequences flagged as poor quality0
Sequence length150-2613
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGTTACGTATTGCTGGTGCTGTCTCGGAGATAGTTCTCACTGCTGTTAA11900.9372957049802696No Hit
GTTACGTATTGCTGGTGCTGTCTCGGAGATAGTTCTCACTGCTGTTAACC7710.607273099613267No Hit
CAGTTACGTATTGCTGGTGCTGTCTCGAGATAGTTCTCACTGCTGTTAAC4600.36231598679909577No Hit
GCGTTACGTATTGCTGGTGCTGTCTCGGAGATAGTTCTCACTGCTGTTAA2950.23235481762115925No Hit
AGTTACGTATTGCTGGTGCTGTCTCGGAGATAGTTCTCACTGCTGTTAAC2870.22605367002465324No Hit
TTTACGTATTGCTGGTGCTGTCTCGGAGATAGTTCTCACTGCTGTTAACC2740.21581430518033098No Hit
CCAGTTACGTATTGCTGGTGCTGTCTCGGAGATAGTTCTCACTGCTGTTA2410.18982207134474366No Hit
GTTACGTATTGCTGGTGCTGTCTCGAGATAGTTCTCACTGCTGTTAACCT2200.1732815589039154No Hit
TGGTTACGTATTGCTGGTGCTGTCTCGGAGATAGTTCTCACTGCTGTTAA2020.15910397681177685No Hit
TGCCATGTATTGCTGGTGCTGTCTCGGAGATAGTTCTCACTGCTGTTAAC1680.1323240995266263No Hit
GGTTACGTATTGCTGGTGCTGTCTCGGAGATAGTTCTCACTGCTGTTAAC1640.12917352572837326No Hit
AAAGTTACGTATTGCTGGTGCTGTCTCGGAGATAGTTCTCACTGCTGTTA1450.1142083001866715No Hit
TAAGTTACGTATTGCTGGTGCTGTCTCGGAGATAGTTCTCACTGCTGTTA1340.10554422224147574No Hit
AGGTTACGTATTGCTGGTGCTGTCTCGGAGATAGTTCTCACTGCTGTTAA1280.10081836154409622No Hit
CCAGTTACGTATTGCTGGTGCTGTCTCGAGATAGTTCTCACTGCTGTTAA1280.10081836154409622No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)