FastQCFastQC Report
Fri 2 Sep 2022
EGAF00004955730

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955730
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20930
Sequences flagged as poor quality0
Sequence length150-1937
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGTTACGTATTGCTGGTGCTGTGGAAGATGAGACCCTGATCTACGTTAA2381.1371237458193981No Hit
CAGTTACGTATTGCTGGTGCTGTGGAAGATGAGACCTGATCTACGTTAAC1380.6593406593406593No Hit
GTTACGTATTGCTGGTGCTGTGGAAGATGAGACCCTGATCTACGTTAACC980.46822742474916385No Hit
GTTACGTATTGCTGGTGCTGTGGAAGATGAGACCTGATCTACGTTAACCT790.3774486383182035No Hit
CCAGTTACGTATTGCTGGTGCTGTGGAAGATGAGACCCTGATCTACGTTA660.31533683707596755No Hit
GCGTTACGTATTGCTGGTGCTGTGGAAGATGAGACCCTGATCTACGTTAA510.24366937410415673No Hit
AGTTACGTATTGCTGGTGCTGTGGAAGATGAGACCCTGATCTACGTTAAC480.22933588150979453No Hit
GCGTTACGTATTGCTGGTGCTGTGGAAGATGAGACCTGATCTACGTTAAC470.22455805064500717No Hit
TGGTTACGTATTGCTGGTGCTGTGGAAGATGAGACCCTGATCTACGTTAA390.18633540372670807No Hit
CCAGTTACGTATTGCTGGTGCTGTGGAAGATGAGACCTGATCTACGTTAA370.1767797419971333No Hit
TGGTTACGTATTGCTGGTGCTGTGGAAGATGAGACCTGATCTACGTTAAC310.148112756808409No Hit
CAGTTACGTATTGCTGGTGCTGGAAGATGAGACCCTGATCTACGTTAACC270.12900143334925943No Hit
GGTTACGTATTGCTGGTGCTGTGGAAGATGAGACCCTGATCTACGTTAAC260.12422360248447205No Hit
TTTACGTATTGCTGGTGCTGTGGAAGATGAGACCCTGATCTACGTTAACC250.11944577161968467No Hit
CAGTTACGTATTGCTGGTGCTGTGAAGATGAGACCCTGATCTACGTTAAC240.11466794075489727No Hit
AGTTACGTATTGCTGGTGCTGTGGAAGATGAGACCTGATCTACGTTAACC220.10511227902532251No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)