FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004955731

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955731
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92081
Sequences flagged as poor quality0
Sequence length150-2228
%GC53

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGTTACGTATTGCTGGTGCTGTTCTGAAGTTCCTGGGTCTTGAACTTAA12041.3075444445651112No Hit
GTTACGTATTGCTGGTGCTGTTCTGAAGTTCCTGGGTCTTGAACTTAACC5520.5994722038205492No Hit
CCAGTTACGTATTGCTGGTGCTGTTCTGAAGTTCCTGGGTCTTGAACTTA3280.35620812111076117No Hit
GCGTTACGTATTGCTGGTGCTGTTCTGAAGTTCCTGGGTCTTGAACTTAA3040.33014411224899815No Hit
CAGTTACGTATTGCTGGTGCTGTTCTGAAGTTCCTGGTCTTGAACTTAAC2810.3051661037564753No Hit
AGTTACGTATTGCTGGTGCTGTTCTGAAGTTCCTGGGTCTTGAACTTAAC2550.276930094156232No Hit
CAGTTACGTATTGCTGGTGCTGTTCTGAAGTTCTGGGTCTTGAACTTAAC1720.18679206350930158No Hit
TGGTTACGTATTGCTGGTGCTGTTCTGAAGTTCCTGGGTCTTGAACTTAA1700.18462006277082135No Hit
TTTACGTATTGCTGGTGCTGTTCTGAAGTTCCTGGGTCTTGAACTTAACC1680.1824480620323411No Hit
GGTTACGTATTGCTGGTGCTGTTCTGAAGTTCCTGGGTCTTGAACTTAAC1430.15529805280133796No Hit
GTTACGTATTGCTGGTGCTGTTCTGAAGTTCCTGGTCTTGAACTTAACCT1210.1314060446780552No Hit
GTTACGTATTGCTGGTGCTGTTCTGAAGTTCTGGGTCTTGAACTTAACCT1180.12814804357033482No Hit
CGTTACGTATTGCTGGTGCTGTTCTGAAGTTCCTGGGTCTTGAACTTAAC1090.11837404024717368No Hit
AGGTTACGTATTGCTGGTGCTGTTCTGAAGTTCCTGGGTCTTGAACTTAA1070.11620203950869343No Hit
TAAGTTACGTATTGCTGGTGCTGTTCTGAAGTTCCTGGGTCTTGAACTTA1000.10860003692401256No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)