EGAF00004955969 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004955969
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15768502
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACGTAGAACTCAATCTAAAACTTCGATTTGCAACTTACC	50187	0.31827373329438646	No Hit
AGTATGGCCCGGGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACC	48393	0.3068966221395032	No Hit
AGTATGGCCCGGGGGATCCTTATCTGTCAAAACCGCTAATGTCCGTTCTA	40769	0.25854707060949733	No Hit
GTACTGGATGCATCTGCAGGATATCGCGGCCGCCATCTGCCCTACGTTTG	40179	0.2548054342765089	No Hit
AGTATGGCCCGGGGGATCCTAGAGACCATTCGCGATTCCATGAGACTCCA	35639	0.22601385978198818	No Hit
GTACTGGATGCATCTGCAGGATATCGCGGCCGCGTCTTCAGAGGGGGATAGCATGACCTCACGCCTTCTATAAA	31956	0.20265717060504543	No Hit
AGTATGGCCCGGGGGATCCGTATACGTTTCTAATTTGTAGTTAACGGTTG	31860	0.20204836198137271	No Hit
GTACTGGATGCATCTGCAGGATATCGCGGCCGCAGAAGACCTAAGCTAGC	29233	0.18538856766482956	No Hit
GTACTGGATGCATCTGCAGGATATCGCGGCCGCTCTAAACGTGGTAAATT	18842	0.11949137590875786	No Hit
AGTATGGCCCGGGGGATCCGTTAGCTATCGTTCGCGAGAAAGTTAGTAGACACACAGGACCCAGGCGTGCAAGTC	18446	0.11698004033610801	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGGCC	27110	51.76169	3
GTATGGC	27745	50.541664	2
AGTATGG	27500	50.01954	1
TGGCCCG	29145	48.123352	5
ACTTACC	8270	47.989716	69
CCGGGGG	29575	47.42367	9
CGGGGGA	29670	47.29526	10
GGGGATC	31040	45.387028	12
GGGATCC	31510	44.687973	13
CCCGGGG	31460	44.571117	8
TCCTACG	8025	44.451492	17
GATCCTA	14155	44.11441	15
ATGGCCC	31930	43.947716	4
GGATCCG	10715	42.60461	14
CATACTA	8215	42.069065	5
TAATATG	8360	41.7762	70
GCCCGGG	33615	41.74477	7
GGCCCGG	33740	41.67255	6
TACTGGA	31230	41.650654	2
ATCCTAC	8740	40.934357	16