FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004961741

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004961741
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3486322
Sequences flagged as poor quality0
Sequence length125
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTA48470.13902903977314776No Hit
GGTCAGGGTCGTGTGATTGTAAACTAGTCAGGTCAGGGTCGTGTGATTGT41810.11992581293408927No Hit
ACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTA38270.10977184551513026No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)