FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004961765

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004961765
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3337551
Sequences flagged as poor quality0
Sequence length125
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTA46450.13917390326020485No Hit
GGTCAGGGTCGTGTGATTGTAAACTAGTCAGGTCAGGGTCGTGTGATTGT42480.12727895393958025No Hit
ACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTA36350.10891219340168884No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)