Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004961775 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4962377 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATACG | 255 | 8.8584784E-10 | 25.66164 | 1 |
TCGTGTG | 9735 | 0.0 | 21.08067 | 9 |
GTCGTGT | 7190 | 0.0 | 20.600422 | 8 |
GGTCGTG | 7140 | 0.0 | 20.578472 | 7 |
GTGTAAG | 2620 | 0.0 | 20.434929 | 1 |
TGTAGCG | 410 | 2.5465852E-11 | 20.311457 | 2 |
GGGTCGT | 7095 | 0.0 | 20.289782 | 6 |
TATACGC | 240 | 8.900895E-6 | 19.82785 | 2 |
AGGGTCG | 7515 | 0.0 | 19.472446 | 5 |
GTACTAG | 1230 | 0.0 | 19.345804 | 1 |
CTATACT | 2185 | 0.0 | 19.328947 | 4 |
TACACTG | 3000 | 0.0 | 19.233791 | 5 |
GTATAGG | 1155 | 0.0 | 19.056873 | 1 |
TAGACTG | 2700 | 0.0 | 18.947376 | 5 |
GGATCGT | 3385 | 0.0 | 18.803535 | 6 |
TCGTAGG | 255 | 1.5016778E-5 | 18.661505 | 2 |
GTGTAGG | 2125 | 0.0 | 18.476381 | 1 |
ATCGTGT | 3330 | 0.0 | 18.399187 | 8 |
TCTATAC | 1395 | 0.0 | 18.335617 | 3 |
CCTATAC | 1465 | 0.0 | 18.271582 | 3 |