Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004961875 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 8867342 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTATACT | 3130 | 0.0 | 24.324787 | 4 |
GTCGTAG | 460 | 5.456968E-12 | 19.396755 | 1 |
TCGTGTG | 7210 | 0.0 | 19.056278 | 9 |
GTCGTGT | 4735 | 0.0 | 18.967968 | 8 |
GGTCGTG | 4780 | 0.0 | 18.914364 | 7 |
GGGTCGT | 4825 | 0.0 | 18.491514 | 6 |
CGTTACG | 290 | 2.2018485E-6 | 18.458902 | 9 |
TCTATAC | 2425 | 0.0 | 18.15112 | 3 |
TATACTG | 5060 | 0.0 | 17.632917 | 5 |
AGGGTCG | 5205 | 0.0 | 17.370258 | 5 |
CGATACG | 120 | 1.9913145E-4 | 17.353775 | 116-117 |
CCTATAC | 2235 | 0.0 | 17.032793 | 3 |
TACACTG | 4865 | 0.0 | 16.994772 | 5 |
TCGTAGG | 425 | 1.7154889E-8 | 16.79493 | 2 |
GTCTAGG | 4265 | 0.0 | 16.736238 | 1 |
GTATACG | 465 | 2.8867362E-9 | 16.629763 | 1 |
GTATCCG | 395 | 1.3634599E-7 | 16.564993 | 1 |
GTATTAC | 2700 | 0.0 | 16.52316 | 1 |
GTCTAGA | 5265 | 0.0 | 16.494917 | 1 |
GTAACGC | 1530 | 0.0 | 16.327482 | 9 |