Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004961920 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 9103017 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATAGCG | 445 | 3.6379788E-12 | 20.049204 | 2 |
TATACTG | 5360 | 0.0 | 18.8646 | 5 |
CTATACT | 3390 | 0.0 | 18.773394 | 4 |
GTATAGG | 2490 | 0.0 | 18.63248 | 1 |
GGGTCGT | 4955 | 0.0 | 18.365858 | 6 |
TCGTGTG | 7850 | 0.0 | 18.260223 | 9 |
GTACTAG | 2185 | 0.0 | 18.238905 | 1 |
TACACTG | 5420 | 0.0 | 18.107067 | 5 |
GTCCTAG | 4045 | 0.0 | 17.498621 | 1 |
GGTCGTG | 5025 | 0.0 | 17.39982 | 7 |
TCTATAC | 2340 | 0.0 | 17.284298 | 3 |
GTCGTGT | 4915 | 0.0 | 17.18397 | 8 |
TACACAG | 8265 | 0.0 | 16.983713 | 5 |
GTATACG | 425 | 1.7160346E-8 | 16.794525 | 1 |
GGATCGT | 3935 | 0.0 | 16.475752 | 6 |
TAGACTG | 5070 | 0.0 | 16.424173 | 5 |
TATAGGG | 3340 | 0.0 | 16.383522 | 2 |
AGGGTCG | 5450 | 0.0 | 16.152088 | 5 |
GTGTAGG | 4085 | 0.0 | 16.01681 | 1 |
TCCGGAC | 1275 | 0.0 | 15.860886 | 3 |