Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004961939 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 7307674 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTACGAC | 675 | 0.0 | 22.912212 | 3 |
TACACTG | 4075 | 0.0 | 22.480474 | 5 |
CGATACC | 2075 | 0.0 | 22.360802 | 118-119 |
GCTACGA | 500 | 0.0 | 21.414108 | 2 |
GTCGTGT | 3490 | 0.0 | 21.305902 | 8 |
GGGTCGT | 3545 | 0.0 | 21.143581 | 6 |
GGTCGTG | 3665 | 0.0 | 20.938086 | 7 |
TCGTGTG | 5225 | 0.0 | 20.606518 | 9 |
CCTATAC | 2015 | 0.0 | 19.778677 | 3 |
AGGGTCG | 3970 | 0.0 | 19.17926 | 5 |
CTATACT | 2580 | 0.0 | 18.905651 | 4 |
GTATAGG | 1545 | 0.0 | 18.866135 | 1 |
CGTATCG | 190 | 8.341009E-4 | 18.78495 | 9 |
GTGTAAG | 3645 | 0.0 | 18.604698 | 1 |
TATACTG | 3930 | 0.0 | 18.314926 | 5 |
GTCTAGG | 3460 | 0.0 | 17.708284 | 1 |
GTCTAGA | 4610 | 0.0 | 17.678074 | 1 |
TAGACTG | 3905 | 0.0 | 17.518187 | 5 |
GTCCTAT | 2730 | 0.0 | 17.431818 | 1 |
GTATAGA | 1915 | 0.0 | 17.395407 | 1 |