FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004961992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004961992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2845244
Sequences flagged as poor quality0
Sequence length125
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTA45150.1586858631456564No Hit
ACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTA35900.1261754703638774No Hit
GGTCAGGGTCGTGTGATTGTAAACTAGTCAGGTCAGGGTCGTGTGATTGT32910.11566670556198344No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)