FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004962360

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004962360
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20235398
Sequences flagged as poor quality0
Sequence length101
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG15500.010.11281944-45
ATCGGAA29100.08.3252072
GATCGGA27850.07.85644631
TCTCGTA21100.07.31629942-43
CTCGTAT16650.06.561506744-45
TATGCCG16750.06.380511848-49
CGTATGC18050.05.92097446-47
Produced by FastQC (version 0.11.5)