FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004962378

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004962378
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20676457
Sequences flagged as poor quality0
Sequence length101
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG17350.09.30827144-45
TCTCGTA23050.06.80037142-43
ATCGGAA28300.06.71400262
GATCGGA26400.06.486241
TATGCCG16650.05.848265648-49
CGTATGC18650.05.47580146-47
ATGCCGT29400.05.331557848-49
CTCGTAT17500.05.292808544-45
CTACTAA242900.05.0326881
Produced by FastQC (version 0.11.5)