FastQCFastQC Report
Tue 19 Apr 2022
EGAF00004962493

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004962493
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences413981997
Sequences flagged as poor quality0
Sequence length151
%GC41

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1092050.029.2238859
GAGCGTC1429600.022.521368
ATCGGAA1623300.020.0290891
TCGGAAG1742300.018.7152142
AGAGCGT1779000.018.2570087
CGGAAGA1982700.016.5154953
AAGAGCG2187800.014.9648666
CGCCGTA607000.011.01444555-59
TCGCCGT739850.09.18559955-59
GCCGTAT842250.08.21343155-59
GTCGCCG840300.08.07546855-59
GAAGAGC4801150.07.36732055
CCGTATC959600.07.1546155-59
TGGTCGC989200.07.05348250-54
GGTCGCC995100.06.85866450-54
CGTATCA1056100.06.7051660-64
GCGTCGT1013800.06.58399410-14
GTGGTCG1125900.06.316859750-54
CGTCGTG1068450.06.286580610-14
TCGTGTA1349150.05.19460810-14
Produced by FastQC (version 0.11.5)