FastQCFastQC Report
Tue 19 Apr 2022
EGAF00004962614

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004962614
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences449820127
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA4047900.016.1848011
TCGGAAG4118500.015.8364672
CGGAAGA4331100.015.0842423
AGAGCAC6611650.010.2237157
AGCACAC6815500.09.9327259
GAGCACA7002000.09.7137168
GAAGAGC7280600.09.370815
TATGCCG1555650.08.98712845-49
CGTATGC1704750.08.16708145-49
CTCGTAT1623000.07.70152640-44
ATGCCGT1837100.07.69550345-49
GCCGTCT1868150.07.44305650-54
AAGAGCA9617300.07.3562936
TCTCGTA1708700.07.342408740-44
TGCCGTC1865500.07.126803445-49
CGTCTTC2070850.06.903553550-54
TCGTATG1744100.06.85004640-44
CCGTCTT2138250.06.70900150-54
GGAAGAG10859650.06.5675514
ATCTCGT1984700.06.38124940-44
Produced by FastQC (version 0.11.5)