FastQCFastQC Report
Fri 2 Sep 2022
EGAF00004963780

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004963780
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences386595
Sequences flagged as poor quality0
Sequence length36-90
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGT5328613.783416753967332No Hit
GGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGAC4780312.365136641705144No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA275347.1221821285841775No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTG235336.087248929758533No Hit
GGGATTCCTGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTCCGTGGC25090.6489995990636196No Hit
GGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGCC14200.3673094582185491No Hit
GGGGATTCCTGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTCCGTGG14110.36498144052561465No Hit
GGGCTTTTTCGCAACGGGTTTGCCGCCAGAACACAGGTGTCGTGAAAACT10670.2759994309290084No Hit
GGGATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTAT10550.2728954073384291No Hit
GGGGCAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTG10340.2674633660549154No Hit
GGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG9750.2522019167345672No Hit
GGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCG9410.24340718322792587No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGC9110.23564712425147763No Hit
GGGCCTTTCCGGCGGTGACGACCTACGCACACGAGAACATGCCTCTCGCA9010.2330604379259949No Hit
GGGTTACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAG8990.23254310066089834No Hit
GGGAGATGCACAGGAGGAGAAGCAGGAGCTGTCGGGAAGATCAGAAGCCA8920.23073242023306045No Hit
GGGGGGGCATTCCTGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTCC8760.22659372211228804No Hit
GGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCCCCATGGTGCTGT8290.21443629638251918No Hit
GGGGCTTTTTCGCAACGGGTTTGCCGCCAGAACACAGGTGTCGTGAAAAC8000.20693490603861925No Hit
GGGCTCTTTTTCCGGCTGGAACCATGGAGGGTGTAGAAGAGAAGAAGAAG7920.20486555697823303No Hit
GGGTACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA7540.19503614894139862No Hit
GGGACTCTTCTGGTCCCCACAGACTCAGAGAGCACCCACCATGGTGCTGT7490.19374280577865727No Hit
GGGGCTCTTTTTCCGGCTGGAACCATGGAGGGTGTAGAAGAGAAGAAGAA7420.19193212535081933No Hit
GGGGGGCATTCCTGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTCCG7290.18856943312769175No Hit
GGGATGACCCCAATACGCAAAATTAACCCCCTAATAAAATTAATTAACCG6450.16684126799363677No Hit
GGGAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG6400.16554792483089537No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCCCCATGGTGCTG5950.15390783636622304No Hit
GGGGGCAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTT5650.14614777738977483No Hit
GGGGAGATGCACAGGAGGAGAAGCAGGAGCTGTCGGGAAGATCAGAAGCC5480.14175041063645416No Hit
GGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGC5070.13114499670197494No Hit
GGGGCCTTTCCGGCGGTGACGACCTACGCACACGAGAACATGCCTCTCGC4940.12778230447884736No Hit
GGGGAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT4670.12079825140004397No Hit
GGGCTAGCACTCTGACCTAGCAGTCAACATGAAGGCTCTCATTGTTCTGG4630.11976357686985088No Hit
GGGACTCTTCTGGTCCCCACAGACTCAGAGAGACCCCACCATGGTGCTGT4560.11795289644201297No Hit
GGGCCTTTCGGCCGGAACCGCCATCTTCCAGTAATTCGCCAAAATGACGA4380.11329686105614402No Hit
GGGACTCTTCTGGTCCCCACAGCCTCAGAGAGAACCCACCATGGTGCTGT4260.11019283746556473No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGCACCCACCATGGTGCTG4110.10631280797734062No Hit
GGGACATTTGCTTCTGACACAACTGTGTTCACTAGCACCCTCAAACAGAC4100.10605413934479235No Hit
GGGGCCTTTCGGCCGGAACCGCCATCTTCCAGTAATTCGCCAAAATGACG4010.10372612165185789No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3950.10217410985656823No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)