FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004963858

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004963858
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13326
Sequences flagged as poor quality0
Sequence length36-90
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGAC5444.082245234879184No Hit
GGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGT5283.9621791985592076No Hit
GGGATAGTTCTCCCTGAGTGAGACTTGCCTGCTGCTCTGGCCCCTGGTCC4013.0091550352693983No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA2992.2437340537295514No Hit
GGGAGTTCTCCCTGAGTGAGACTTGCCTGCTGCTCTGGCCCCTGGTCCTG2932.1987092901095604No Hit
GGGGATAGTTCTCCCTGAGTGAGACTTGCCTGCTGCTCTGGCCCCTGGTC2692.018610235629596No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTG2651.9885937265496023No Hit
GGGGAGTTCTCCCTGAGTGAGACTTGCCTGCTGCTCTGGCCCCTGGTCCT2171.6283956175896743No Hit
GGGAGATGCACAGGAGGAGAAGCAGGAGCTGTCGGGAAGATCAGAAGCCA1941.4558006903797087No Hit
GGGAGGACTCAGAGGCTGGGATCATGGTAGATGGAACCCTCCTTTTACTC1941.4558006903797087No Hit
GGGGAGGACTCAGAGGCTGGGATCATGGTAGATGGAACCCTCCTTTTACT1351.0130571814497973No Hit
GGGGTTCTCCCTGAGTGAGACTTGCCTGCTGCTCTGGCCCCTGGTCCTGT1160.870478763319826No Hit
GGGGAGATGCACAGGAGGAGAAGCAGGAGCTGTCGGGAAGATCAGAAGCC1140.8554705087798289No Hit
GGGATTCTTGTCTGTTCTGCCTCACTCCCGAGCTCTACTGACTCCCAACA990.7429085997298513No Hit
GGGGGTTCTCCCTGAGTGAGACTTGCCTGCTGCTCTGGCCCCTGGTCCTG880.6603631997598679No Hit
GGGAGTCTCATCTGCCTCCACTCGGCCTCAGTTCCTCATCACTGTTCCTG840.6303466906798739No Hit
GGGATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTAT830.6228425634098754No Hit
GGGATAGTTCTCCCTGAGTGAGACTTGCCTGCTCCTCTGGCCCCTGGTCC770.5778177997898845No Hit
GGGATTCCTGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTCCGTGGC740.555305417979889No Hit
GGGGCAGACACTGACCTTCAGCGCCTCGGCTCCAGCGCCATGGCGCCCTC630.47276001800990547No Hit
GGGGAGTCTCATCTGCCTCCACTCGGCCTCAGTTCCTCATCACTGTTCCT620.4652558907399069No Hit
GGGGATTCTTGTCTGTTCTGCCTCACTCCCGAGCTCTACTGACTCCCAAC610.4577517634699085No Hit
GGGCTTCTTTTCCTGACTGCAGCTCTTTTCATTTTGCCATCCTTTTCCAG580.435239381659913No Hit
GGGGATAGTTCTCCCTGAGTGAGACTTGCCTGCTCCTCTGGCCCCTGGTC570.42773525438991444No Hit
GGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCG530.3977187453099205No Hit
GGGCCATCAGGTCCGAGCTGTGTTGACTACCACTACTTTTCCCTTCGTCT500.375206363499925No Hit
GGGGAGATCCATCAGGTCCGAGCTGTGTTGACTACCACTTTTCCCTTCGT460.34518985441993094No Hit
GGGAGATCCATCAGGTCCGAGCTGTGTTGACTACCACTTTTCCCTTCGTC450.3376857271499325No Hit
GGGGAGTGAGACTTGCCTGCTGCTCTGGCCCCTGGTCCTGTCCTGTTCTC390.2926609635299415No Hit
GGGCCCTTTAGCGAGTCCTTCTTTTCCTGACTGCAGCTCTTTTCATTTTG390.2926609635299415No Hit
GGGGCCCTTTAGCGAGTCCTTCTTTTCCTGACTGCAGCTCTTTTCATTTT360.27014858171994593No Hit
GGGCATCAGGTCCGAGCTGTGTTGACTACCACTACTTTTCCCTTCGTCTC340.255140327179949No Hit
GGGGCTTCTTTTCCTGACTGCAGCTCTTTTCATTTTGCCATCCTTTTCCA310.23262794536995346No Hit
GGGGATTCCTGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTCCGTGG310.23262794536995346No Hit
GGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGC300.22512381809995496No Hit
GGGCAAGGATTACATCGCCCTGAAAGAGGACCTGCGCTCTTGGACCGCGG290.2176196908299565No Hit
GGGCAAGGATTACATCGCCCTGAACGAGGATCTGCGCTCCTGGACCGCCG280.21011556355995797No Hit
GGGAGATCCATCAGGTCCGAGCTGTGTTGACTACCACTACTTTTCCCTTC280.21011556355995797No Hit
GGGCCTTCTTTTCCTGACTGCAGCTCTTTTCATTTTGCCATCCTTTTCCA280.21011556355995797No Hit
GGGGAGCTCTACTGACTCCCAACAGAGCGCCCAAGAAGAAAATGGCCATA260.19510730901996098No Hit
GGGCCTTTCCGGCGGTGACGACCTACGCACACGAGAACATGCCTCTCGCA260.19510730901996098No Hit
GGGAGACGCCGAGATGCGGGTCATGGCGCCCCGAACCCTCATCCTGCTGC260.19510730901996098No Hit
GGGGGCAGACACTGACCTTCAGCGCCTCGGCTCCAGCGCCATGGCGCCCT250.1876031817499625No Hit
GGGAGATTCTCCCCAGACGCCGAGGATGGCCGTCATGGCGCCCCGAACCC240.18009905447996397No Hit
GGGGGGCATTCCTGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTCCG230.17259492720996547No Hit
GGGATCAGGTCCGAGCTGTGTTGACTACCACTACTTTTCCCTTCGTCTCA220.16509079993996698No Hit
GGGCCAGATGCACAGGAGGAGAAGCAGGAGCTGTCGGGAAGATCAGAAGC220.16509079993996698No Hit
GGGCTGGCTAACATTGCTATATTGAACAACAACTTGAATACCTTGATCCA220.16509079993996698No Hit
GGGGACTCGGCCTCAGTTCCTCATCACTGTTCCTGTGCTCACAGTCATCA220.16509079993996698No Hit
GGGAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG210.15758667266996848No Hit
GGGACTCCCGAGCTCTACTGACTCCCAACAGAGCGCCCAAGAAGAAAATG210.15758667266996848No Hit
GGGCGCCTCCTCCGCGGGTATAACCAGTTCGCCTACGACGGCAAGGATTA210.15758667266996848No Hit
GGGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTC200.15008254539996999No Hit
GGGCCTTTAGCGAGTCCTTCTTTTCCTGACTGCAGCTCTTTTCATTTTGC200.15008254539996999No Hit
GGGCTTTCTGCCAGGTACATCAGATCCATCAGGTCCGAGCTGTGTTGACT190.1425784181299715No Hit
GGGGCAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTG190.1425784181299715No Hit
GGGGCCATCAGGTCCGAGCTGTGTTGACTACCACTACTTTTCCCTTCGTC190.1425784181299715No Hit
GGGAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGT190.1425784181299715No Hit
GGGCTTCTTGTCTGTTCTGCCTCACTCCCGAGCTCTACTGACTCCCAACA180.13507429085997297No Hit
GGGGAGTGAGACTTGCCTGCTCCTCTGGCCCCTGGTCCTGTCCTCTTCTC180.13507429085997297No Hit
GGGAGACACTGACCTTCAGCGCCTCGGCTCCAGCGCCATGGCGCCCTCCA180.13507429085997297No Hit
GGGTACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA170.1275701635899745No Hit
GGGGTCCCAGATGCACAGGAGGAGAAGCAGGAGCTGTCGGGAAGATCAGA170.1275701635899745No Hit
GGGGAGATTCTCCCCAGACGCCGAGGATGGCCGTCATGGCGCCCCGAACC170.1275701635899745No Hit
GGGCCCAGATGCACAGGAGGAGAAGCAGGAGCTGTCGGGAAGATCAGAAG170.1275701635899745No Hit
GGGGAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT170.1275701635899745No Hit
GGGGAGATCCATCAGGTCCGAGCTGTGTTGACTACCACTACTTTTCCCTT160.12006603631997599No Hit
GGGTTACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAG160.12006603631997599No Hit
GGGCACTCGGCCTCAGTTCCTCATCACTGTTCCTGTGCTCACAGTCATCA160.12006603631997599No Hit
GGGGGGGCATTCCTGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTCC160.12006603631997599No Hit
GGGGCCTTCTTTTCCTGACTGCAGCTCTTTTCATTTTGCCATCCTTTTCC160.12006603631997599No Hit
GGGGAGTTCTCCCTGAGTGAGACTTGCCTGCTCCTCTGGCCCCTGGTCCT160.12006603631997599No Hit
GGGAGACGCCGAGATGCTGGTCATGGCGCCCCGAACCGTCCTCCTGCTGC160.12006603631997599No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG160.12006603631997599No Hit
GGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGCC150.11256190904997748No Hit
GGGGCCCAGATGCACAGGAGGAGAAGCAGGAGCTGTCGGGAAGATCAGAA150.11256190904997748No Hit
GGGAGGTTCTAAAGTCCCACGCACCCCGCGGGACTCATATTTTTCCCAGA150.11256190904997748No Hit
GGGGCCTTTCCGGCGGTGACGACCTACGCACACGAGAACATGCCTCTCGC150.11256190904997748No Hit
GGGGGAGTGAGACTTGCCTGCTGCTCTGGCCCCTGGTCCTGTCCTGTTCT150.11256190904997748No Hit
GGGAGTTCTCCCTGAGTGAGACTTGCCTGCTCCTCTGGCCCCTGGTCCTG150.11256190904997748No Hit
GGGGAGACACTGACCTTCAGCGCCTCGGCTCCAGCGCCATGGCGCCCTCC140.10505778177997899No Hit
GGGGACTCCCGAGCTCTACTGACTCCCAACAGAGCGCCCAAGAAGAAAAT140.10505778177997899No Hit
GGGGGGTGGAGGGGTTCATAGTTCTCCCTGAGTGAGACTTGCCTGCTGCT140.10505778177997899No Hit
GGGGGAGTGAGACTTGCCTGCTCCTCTGGCCCCTGGTCCTGTCCTCTTCT140.10505778177997899No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)