FastQCFastQC Report
Tue 19 Apr 2022
EGAF00004963960

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004963960
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences456440624
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1698900.041.7479361
TCGGAAG1839150.038.5208472
CGGAAGA2078200.034.1876533
TATGCCG899300.016.11021245-49
AGAGCAC4616800.015.8725697
AGCACAC4918500.014.9567559
GAGCACA5074700.014.540348
GAAGAGC5196100.014.2341025
CGTATGC1031050.014.03614245-49
CTCGTAT965050.013.59780240-44
TCTCGTA1001000.013.15869640-44
ATGCCGT1187100.012.35467845-49
TGCCGTC1174750.012.26241645-49
GTCACGA1211850.012.12499925-29
GCCGTCT1223850.011.84945950-54
TCGTATG1107750.011.64196140-44
ACGAGAT1347000.011.0499330-34
ATCTCGT1244750.010.71471240-44
AGTCACG1461050.010.20976125-29
CGTCTTC1517700.09.93827150-54
Produced by FastQC (version 0.11.5)