FastQCFastQC Report
Tue 19 Apr 2022
EGAF00004963970

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004963970
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences463625168
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1231300.026.5534651
TCGGAAG1393000.023.4383562
CGGAAGA1608750.020.3034293
TATGCCG667050.010.31870645-49
CGTATGC789250.08.7761745-49
CTCGTAT732150.08.66633540-44
AGAGCAC4247900.08.2917827
TCTCGTA780400.08.11379740-44
AGCACAC4582000.07.72989659
GAGCACA4715150.07.62230448
ATGCCGT953000.07.46142845-49
GAAGAGC4813450.07.43476255
TGCCGTC962150.07.19455645-49
GCCGTCT1015850.06.96480450-54
TCGTATG928900.06.776087840-44
ATCTCGT1019450.06.425967740-44
ACACGTC1253350.05.774263410-14
CGTCTGA1259450.05.731257415-19
CGTCTTC1303050.05.72351950-54
CCGTCTT1326250.05.612463550-54
Produced by FastQC (version 0.11.5)