FastQCFastQC Report
Tue 19 Apr 2022
EGAF00004963971

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004963971
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences463625168
Sequences flagged as poor quality0
Sequence length151
%GC40

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1565950.020.7059129
GAGCGTC1938550.016.9205688
ATCGGAA2135000.015.5733281
AGAGCGT2282700.014.43310457
TCGGAAG2313300.014.3803892
CGGAAGA2535750.013.1644863
AAGAGCG2753150.012.127436
CGCCGTA880800.07.82515355-59
TCGCCGT1023200.06.79421155-59
GCCGTAT1118450.06.35948555-59
GAAGAGC5770350.06.30506755
GTCGCCG1194350.05.874014455-59
CCGTATC1235500.05.732351355-59
CGTATCA1306800.05.602681660-64
TGGTCGC1314000.05.50465550-54
GGTCGCC1381100.05.12594150-54
GTGGTCG1447250.05.06795950-54
Produced by FastQC (version 0.11.5)