FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004965231

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004965231
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25558793
Sequences flagged as poor quality0
Sequence length35-76
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3005551.175935811992374No Hit
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2475160.9684181878228757No Hit
GTGATTTTATAGCATCCTGGGCATTTCACATCCATGAAGTAGGAATTGGG280230.10964132774188515No Hit
CTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTATATCTATTGCGCC266900.10442590148916657No Hit
GCCAGACTTAGGGCTAGGATGATGATTAATAAGAGGGATGACATAACTAT258400.10110023583664535No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)