EGAF00004966770 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004966770
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	30665423
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	133963	0.4368535858774882	No Hit
GGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGGGACC	56227	0.1833563489406293	No Hit
GGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTTATCCAT	54665	0.17826266410869335	No Hit
CCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTTATCCATTGCACTCC	43885	0.14310906456434663	No Hit
AGGGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTTATCC	39907	0.13013679935215633	No Hit
GGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTTATCCATT	36198	0.11804174362766821	No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGC	36055	0.11757542036840646	No Hit
GTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGGGACCC	32171	0.10490968932663997	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTCGAC	14725	17.99393	1
CGGGACC	17125	15.555588	45
GGTGGCG	7955	15.209262	1
AGGTCGA	9615	15.046328	6
TGGCGCG	7870	14.809129	3
GGCGATC	2015	14.743245	2
GTCGACC	18050	14.687986	2
TCGACCC	18775	14.3206415	3
ACGGGCT	2985	14.2456665	45
TTCCGCA	2260	14.037352	3
TCCGCAG	2300	13.988963	4
GGGCGAT	2315	13.625457	1
GGCGCGT	8610	13.458027	4
ACCCGTG	20225	13.260398	6
GACCCGT	20475	13.1097765	5
CCGGGAC	20265	13.100951	44
CGCAGGT	2545	13.084067	6
AGGGGAG	16490	13.062047	1
CTTCCGC	2500	13.053356	2
GCCGGGA	20470	12.9807415	43