EGAF00004966787 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004966787
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	34511764
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCACAAATTATGCAGTCGAGTTTCCCACATTTGGGGAAATCGCAGGGGTCA	207833	0.6022091481617688	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTTG	157433	0.4561719881950978	No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCT	130453	0.3779957466097647	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT	121672	0.3525522485608096	No Hit
CCCCACTACCACAAATTATGCAGTCGAGTTTCCCACATTTGGGGAAATCGC	106925	0.30982189145706956	No Hit
CACAAATTATGCAGTCGAGTTTCCCACATTTGGGGAAATCGCAGGGGTCAG	94887	0.27494103170153805	No Hit
CCCACTACCACAAATTATGCAGTCGAGTTTCCCACATTTGGGGAAATCGCA	64174	0.185948188565499	No Hit
GTCGAGTTTCCCACATTTGGGGAAATCGCAGGGGTCAGCACATCCGGAGTG	57064	0.16534651778448647	No Hit
ACCACAAATTATGCAGTCGAGTTTCCCACATTTGGGGAAATCGCAGGGGTC	56724	0.164361346467251	No Hit
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGAC	56336	0.16323709214052345	No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGC	51722	0.14986773785309845	No Hit
CCCACATTTGGGGAAATCGCAGGGGTCAGCACATCCGGAGTGCAATGGATA	40076	0.11612272267508553	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	38639	0.11195892507841673	No Hit
ACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	38625	0.11191835920064822	No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	35988	0.10427748636667775	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAACGAT	16585	35.961082	45
AGAACGA	22065	27.111462	44
ACCGCGT	22355	27.061674	6
CCGCGTT	22375	27.057594	7
GACCGCG	22400	27.027395	5
AGACCGC	22635	26.975399	4
CGCGTTC	22675	26.659922	8
CAGACCG	23475	26.10598	3
GCGTTCT	23540	25.69943	9
CAATACG	24145	24.831818	31
ATACGGA	24170	24.759594	33
TACGGAG	24200	24.682417	34
AAGAACG	24220	24.662035	43
AATACGG	24310	24.58924	32
GGACCTT	31435	24.55533	44
ACGGAGA	25360	23.597836	35
CGGAGAG	25680	23.312542	36
GACCTTG	33900	22.849455	45
GCGTACG	1005	22.212135	2
CCCCACT	30710	21.741201	1