FastQCFastQC Report
Fri 2 Sep 2022
EGAF00004969144

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969144
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences726671
Sequences flagged as poor quality0
Sequence length43
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT33550.4616944944823723No Hit
CTCCAGAAGATGCTGCAGGAGGATGAGCTCCGGGATGCGGTGC20250.2786680629886152No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT18850.2594021228313776No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT11290.15536604598229461No Hit
GTAGTGACCTCAGCTCCAGGCTGCAGAACATCACTCTTCAACA10050.13830192755731274No Hit
AGACAAAGGGGTCGGCGAGGCCGGAGCCGCGCGGACCTCGAGT8170.11243052220330796No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)