FastQCFastQC Report
Fri 2 Sep 2022
EGAF00004969145

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969145
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences433363
Sequences flagged as poor quality0
Sequence length43
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT15890.3666672050913437No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT9070.20929336376201935No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT6040.1393750735526568No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)