FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004969148

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969148
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences409418
Sequences flagged as poor quality0
Sequence length43
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT31210.7623016086249261No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT18600.4543034258386295No Hit
ACATACTATGTAGTAGCCCATTTCCACTATGTTCTATCAATGG17680.4318325037003747No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT11530.2816192741892149No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT5050.12334582260672468No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)