FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004969152

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969152
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences366552
Sequences flagged as poor quality0
Sequence length43
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT12110.3303760448722146No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT6740.18387568475959754No Hit
GCATGATACCCATGGCACCCCTGTAGTAGGCTGTCGTGATTGT4910.13395098103406886No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT4210.11485409982758243No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)