FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004969184

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969184
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12392919
Sequences flagged as poor quality0
Sequence length35-76
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN473690.38222633424780716No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT167010.13476243974482524No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG159730.1288881174806355No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)