Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004969210 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 75179113 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATCTCGTAT | 584827 | 0.7779115457241428 | TruSeq Adapter, Index 27 (97% over 39bp) |
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 358900 | 0.47739323553870605 | Clontech SMART CDS Primer II A (100% over 26bp) |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 128694 | 0.17118318488274795 | No Hit |