FastQCFastQC Report
Tue 7 May 2024
EGAF00004969303

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969303
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44938
Total Bases10.7 Mbp
Sequences flagged as poor quality0
Sequence length239
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACTAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA18874.199118785882772No Hit
GGACTACAAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA15343.4135920601717924No Hit
GGACTACTGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA13973.1087275802216388No Hit
GGACTACTCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA13112.917352797187236No Hit
GGACTACCAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA12712.8283412701944903No Hit
GGACTACAGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA12592.8016378120966667No Hit
GGACTACGAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA12482.7771596421736615No Hit
GGACTACGGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA12422.7638079131247495No Hit
GGACTACTAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA11722.608037740887445No Hit
GGACTACACGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA11012.4500422804753215No Hit
GGACTACAAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA10362.3053985491121103No Hit
GGACTACTGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA9802.1807824113222662No Hit
GGACTACGCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA9752.169655970448173No Hit
GGACTACTCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA9602.1362766478258934No Hit
GGACTACGAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA9452.102897325203614No Hit
GGACTACCAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA9352.0806444434554274No Hit
GGACTACCGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA9332.0761938671057902No Hit
GGACTACAGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA8541.9003961012951178No Hit
GGACTACGGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA8031.786906404379367No Hit
GGACTACACGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7871.751301793582269No Hit
GGACTACCCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7551.6800925719880726No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA6961.5488005696737728No Hit
GGACTACCGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA6791.510970670701856No Hit
GGACTACGCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA6491.4442120254572968No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA6001.3351729048911833No Hit
GGACTACCCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA5741.2773154123458987No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA5521.2283590724998887No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA5291.1771774444790601No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA4731.0525613066892163No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA4661.0369842894654857No Hit
GGACTACTAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA4591.0214072722417553No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA4571.016956695892118No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA4440.9880279496194757No Hit
GGACTACAAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA4130.919044016200098No Hit
GGACTACACGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA4080.9079175753260047No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3950.8789888290533624No Hit
GGACTACTCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3850.8567359473051761No Hit
GGACTACTGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3800.8456095064310828No Hit
GGACTACCAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3630.8077796074591659No Hit
GGACTACGGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3490.776625573011705No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3420.7610485557879745No Hit
GGACTACAGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3300.7343450976901509No Hit
GGACTACGAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3280.7298945213405136No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3130.6965151987182341No Hit
GGACTACACGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3050.6787128933196849No Hit
GGACTACCGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2820.6275312652988563No Hit
GGACTACGCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2620.5830255018024835No Hit
GGACTACCCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2070.46063465218745825No Hit
GGACTACTAGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA1030.22920468200631983No Hit
GGACTACGGGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA890.19805064755885887No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA890.19805064755885887No Hit
GGACTACAAGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA860.19137478303440295No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA840.1869242066847657No Hit
GGACTACGAGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA820.1824736303351284No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA790.1757977658106725No Hit
GGACTACCAGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA790.1757977658106725No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA770.1713471894610352No Hit
GGACTACTCGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA770.1713471894610352No Hit
GGACTACAGGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA760.16912190128621657No Hit
GGACTACTGGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA760.16912190128621657No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA750.16689661311139792No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA740.1646713249365793No Hit
GGACTACTAGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA720.160220748586942No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA690.1535448840624861No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA680.15131959588766747No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA670.14909430771284882No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA660.14686901953803017No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA650.14464373136321154No Hit
GGACTACACGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA650.14464373136321154No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA650.14464373136321154No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA640.1424184431883929No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA630.14019315501357427No Hit
GGACTACTCGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA620.13796786683875562No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA620.13796786683875562No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA610.13574257866393696No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA610.13574257866393696No Hit
GGACTACGAGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA600.13351729048911834No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA600.13351729048911834No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA590.13129200231429972No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA590.13129200231429972No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTACCTCA580.12906671413948106No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA570.12684142596466244No Hit
GGACTACTGGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA570.12684142596466244No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA570.12684142596466244No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA570.12684142596466244No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA550.12239084961502514No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA540.12016556144020651No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA540.12016556144020651No Hit
GGACTACCGGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA540.12016556144020651No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA530.11794027326538788No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA520.11571498509056924No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA520.11571498509056924No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA520.11571498509056924No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTACCTCA520.11571498509056924No Hit
GGACTACAGGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA510.11348969691575059No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTACCTCA500.11126440874093195No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA490.10903912056611331No Hit
GGACTACACGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA480.10681383239129467No Hit
GGACTACGGGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA480.10681383239129467No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA480.10681383239129467No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTACCTCA480.10681383239129467No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGATCCCCGCGCTTTCGCACATCA480.10681383239129467No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGATCCCCGCGCTTTCGCACATCA470.10458854421647604No Hit
GGACTACCAGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA460.10236325604165739No Hit
GGACTACGCGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA460.10236325604165739No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA460.10236325604165739No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA460.10236325604165739No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA450.10013796786683875No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA450.10013796786683875No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTACCTCA450.10013796786683875No Hit
GGACTACAAGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA450.10013796786683875No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)