FastQCFastQC Report
Tue 7 May 2024
EGAF00004969325

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969325
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55450
Total Bases13.2 Mbp
Sequences flagged as poor quality0
Sequence length239
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA28885.2082957619477No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA25334.568079350766456No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA21893.947700631199279No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA21673.9080252479711453No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA20613.716862037871957No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA20593.713255184851217No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA19683.5491433724075745No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA19233.4679891794409374No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA18393.3165013525698823No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA18143.2714156898106403No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA17893.2263300270513975No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA15432.7826871055004507No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA15332.764652840396754No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA15162.733994589720469No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA14832.6744815148782686No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA14822.672678088367899No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA14222.564472497745717No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA14222.564472497745717No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA13362.4093778178539225No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA12622.2759242560865642No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA12412.2380522993688006No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA11212.0216411181244363No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA10541.9008115419296663No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA8401.51487826871055No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA2970.5356176735798016No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA2520.454463480613165No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA2330.42019837691614065No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA2230.40216411181244366No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA2190.3949504057709648No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA2110.3805229936880072No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA2080.37511271415689806No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA2050.369702434625789No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1910.34445446348061315No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA1870.33724075743913434No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA1840.3318304779080252No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA1790.32281334535617673No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1740.31379621280432823No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA1690.3047790802524797No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA1680.30297565374211No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1660.2993688007213706No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA1660.2993688007213706No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA1650.2975653742110009No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA1650.2975653742110009No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA1630.2939585211902615No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA1590.2867448151487827No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1510.2723174030658251No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA1490.26871055004508565No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1470.2651036970243463No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1470.2651036970243463No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA1420.2560865644724977No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1420.2560865644724977No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1380.24887285843101892No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA1370.24706943192064923No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1330.23985572587917042No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA1280.23083859332732193No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1250.2254283137962128No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1200.2164111812443643No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA1170.2110009017132552No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA1110.20018034265103699No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1100.19837691614066727No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1090.19657348963029755No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1080.19477006311992787No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA1070.19296663660955815No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1070.19296663660955815No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA1060.19116321009918844No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1040.18755635707844903No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1000.18034265103697023No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA990.17853922452660054No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA940.16952209197475201No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA940.16952209197475201No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA940.16952209197475201No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA920.1659152389540126No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA900.1623083859332732No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA890.16050495942290352No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA870.15689810640216412No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA860.1550946798917944No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA860.1550946798917944No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA810.1460775473399459No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA790.1424706943192065No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA780.1406672678088368No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA750.1352569882777277No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA740.13345356176735798No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA730.1316501352569883No Hit
GGACTACACGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA730.1316501352569883No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA720.12984670874661858No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA710.12804328223624886No Hit
GGACTACAAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA710.12804328223624886No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA700.12623985572587917No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA690.12443642921550946No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA690.12443642921550946No Hit
GGACTACTAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA680.12263300270513977No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA660.11902614968440037No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA660.11902614968440037No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA640.11541929666366096No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA630.11361587015329125No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA630.11361587015329125No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA630.11361587015329125No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA610.11000901713255185No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA580.10459873760144274No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA580.10459873760144274No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTTCCTCA560.10099188458070334No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)