FastQCFastQC Report
Tue 7 May 2024
EGAF00004969361

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969361
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61634
Total Bases14.7 Mbp
Sequences flagged as poor quality0
Sequence length239
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACTAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA17532.844209364960898No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA17382.81987214848947No Hit
GGACTACAAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA15582.5278255508323326No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA14572.3639549599247167No Hit
GGACTACTGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA14062.2812084239218615No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA12842.0832657299542463No Hit
GGACTACAGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA12832.081643248856151No Hit
GGACTACGAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA12612.0459486646980563No Hit
GGACTACTAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA12522.031346334815199No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA12482.0248564104228186No Hit
GGACTACTCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA12291.9940292695590098No Hit
GGACTACGGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA12061.9567122043028198No Hit
GGACTACCAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA11901.9307525067332965No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA11461.8593633384171075No Hit
GGACTACACGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA11451.8577408573190124No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA11331.83827108414187No Hit
GGACTACAAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA11271.8285361975532983No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA11211.8188013109647274No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA11051.7928416133952039No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA10821.755524548139014No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA10721.739299737158062No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA10251.6630431255475875No Hit
GGACTACTGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA9841.5965214005256838No Hit
GGACTACGCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA9291.5072849401304476No Hit
GGACTACGAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA9231.4975500535418762No Hit
GGACTACCGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA9061.4699678748742577No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA9011.4618554693837815No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA8841.434273290716163No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA8721.4148035175390208No Hit
GGACTACTCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA8641.4018236687542591No Hit
GGACTACCAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA8621.3985787065580686No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA8541.385598857773307No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA8471.3742414900866406No Hit
GGACTACAGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA8321.3499042736152125No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA8101.3142096894571178No Hit
GGACTACACGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA8071.3093422461628323No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA7991.2963623973780707No Hit
GGACTACGGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7911.2833825485933088No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA7691.2476879644352143No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA7351.1925236070999772No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA7251.1762987961190252No Hit
GGACTACCCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA6821.1065321089009312No Hit
GGACTACCGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA6391.0367654216828373No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA6361.0318979783885518No Hit
GGACTACGCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA6291.0205406107018855No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA6231.0108057241133142No Hit
GGACTACCCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA4710.7641885972028426No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA4530.7349839374371289No Hit
GGACTACTAGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC2930.4753869617418957No Hit
GGACTACTGGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC2310.37479313365999284No Hit
GGACTACAGGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC2300.3731706525618977No Hit
GGACTACAAGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC2240.3634357659733264No Hit
GGACTACGAGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC2000.3244962196190414No Hit
GGACTACACGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC1920.3115163708342798No Hit
GGACTACCAGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC1900.3082714086380894No Hit
GGACTACTAGGGTATCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC1900.3082714086380894No Hit
GGACTACGGGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC1870.3034039653438037No Hit
GGACTACAAGGGTATCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC1830.29691404095142293No Hit
GGACTACTCGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC1750.2839341921666612No Hit
GGACTACGAGGGTATCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC1580.25635201349904274No Hit
GGACTACCGGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC1550.2514845702047571No Hit
GGACTACTGGGGTATCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC1400.22714735373332903No Hit
GGACTACAGGGGTATCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC1380.2239023915371386No Hit
GGACTACTCGGGTATCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC1350.21903494824285297No Hit
GGACTACCAGGGTATCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC1310.21254502385047214No Hit
GGACTACGCGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC1280.20767758055618654No Hit
GGACTACACGGGTATCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC1240.20118765616380568No Hit
GGACTACCGGGGTATCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC1160.18820780737904402No Hit
GGACTACGGGGGTATCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC1130.1833403640847584No Hit
GGACTACCCGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC1100.17847292079047278No Hit
GGACTACGCGGGTATCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC910.14764577992666386No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA870.14115585553428303No Hit
GGACTACCCGGGTATCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC850.13791089333809262No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA760.12330856345523573No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA740.12006360125904533No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA660.10708375247428367No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)