FastQCFastQC Report
Tue 7 May 2024
EGAF00004969383

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969383
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48112
Total Bases11.4 Mbp
Sequences flagged as poor quality0
Sequence length239
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACTAGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA15933.311024276687729No Hit
GGACTACTAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA12402.5773195876288657No Hit
GGACTACAAGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA12392.5752411040904555No Hit
GGACTACTCGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA12272.550299301629531No Hit
GGACTACTAGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA11192.3258230794812107No Hit
GGACTACTGGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA11112.3091952111739276No Hit
GGACTACAAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA11002.2863318922514133No Hit
GGACTACCAGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA10212.122131692716994No Hit
GGACTACACGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA9712.018207515796475No Hit
GGACTACAAGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA9652.0057366145660125No Hit
GGACTACTCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA9381.9496175590289326No Hit
GGACTACTGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA9101.8914200199534419No Hit
GGACTACGGGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA9041.8789491187229796No Hit
GGACTACAGGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA8981.8664782174925172No Hit
GGACTACTAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA8851.8394579314931825No Hit
GGACTACGAGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA8641.7958097771865646No Hit
GGACTACTCGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA8511.76878949118723No Hit
GGACTACCAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA8171.698121050881277No Hit
GGACTACTGGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA8051.6731792484203527No Hit
GGACTACACGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7771.6149817093448622No Hit
GGACTACCCGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA7711.6025108081143997No Hit
GGACTACCGGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA7381.5339208513468574No Hit
GGACTACGAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7371.531842367808447No Hit
GGACTACACGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA7341.5256069171932158No Hit
GGACTACGGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7311.5193714665779847No Hit
GGACTACAAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7281.5131360159627536No Hit
GGACTACCAGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA7281.5131360159627536No Hit
GGACTACTCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7271.5110575324243432No Hit
GGACTACAGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7081.471566345194546No Hit
GGACTACGCGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA6771.4071333555038246No Hit
GGACTACCGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA6381.3260724975058198No Hit
GGACTACGGGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA6361.3219155304289991No Hit
GGACTACCCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA6331.315680079813768No Hit
GGACTACTGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA6301.3094446291985367No Hit
GGACTACCAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA6241.2969737279680744No Hit
GGACTACGAGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA6161.2803458596607915No Hit
GGACTACACGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA6061.2595610242766877No Hit
GGACTACAGGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA6051.2574825407382773No Hit
GGACTACAGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA5591.1618722979714No Hit
GGACTACGCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA5471.1369304955104755No Hit
GGACTACGAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA5391.1203026272031926No Hit
GGACTACCCGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA5311.1036747588959097No Hit
GGACTACGCGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA5121.0641835716661123No Hit
GGACTACCGGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA5111.062105088127702No Hit
GGACTACGGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA5071.0537911539740605No Hit
GGACTACCGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA4530.9415530428999003No Hit
GGACTACGCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA4500.9353175922846692No Hit
GGACTACCCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA4110.8542567342866644No Hit
GGACTACTAGGGTTTCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA1910.3969903558363818No Hit
GGACTACAAGGGTTTCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA1580.3284003990688394No Hit
GGACTACTCGGGTTTCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA1550.3221649484536082No Hit
GGACTACCAGGGTTTCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA1400.2909876953774526No Hit
GGACTACAGGGGTTTCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA1380.28683072830063183No Hit
GGACTACTGGGGTTTCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA1310.27228134353175926No Hit
GGACTACTAGGGTATCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA1290.2681243764549385No Hit
GGACTACACGGGTTTCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA1260.26188892583970735No Hit
GGACTACAAGGGTATCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA1180.24526105753242436No Hit
GGACTACTCGGGTATCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA1170.243182573994014No Hit
GGACTACGAGGGTTTCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA1060.22031925507149985No Hit
GGACTACCAGGGTATCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA1050.21824077153308946No Hit
GGACTACACGGGTATCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA1000.20784835384103756No Hit
GGACTACTGGGGTATCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA990.2057698703026272No Hit
GGACTACCCGGGTTTCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA970.20161290322580644No Hit
GGACTACGGGGGTTTCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA970.20161290322580644No Hit
GGACTACCGGGGTTTCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA870.1808280678417027No Hit
GGACTACTAGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC830.17251413368806118No Hit
GGACTACAGGGGTATCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA820.1704356501496508No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA820.1704356501496508No Hit
GGACTACGAGGGTATCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA800.16627868307283006No Hit
GGACTACCCGGGTATCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA780.1621217159960093No Hit
GGACTACAAGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC770.16004323245759894No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA770.16004323245759894No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA760.15796474891918855No Hit
GGACTACGCGGGTTTCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA750.15588626538077818No Hit
GGACTACGGGGGTATCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA740.15380778184236782No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA720.14965081476554706No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA720.14965081476554706No Hit
GGACTACTCGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC680.14133688061190555No Hit
GGACTACTAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA670.1392583970734952No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA660.1371799135350848No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA650.13510142999667443No Hit
GGACTACTGGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC610.12678749584303292No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA600.12470901230462256No Hit
GGACTACGCGGGTATCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA600.12470901230462256No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA590.12263052876621218No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA580.1205520452278018No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA570.11847356168939141No Hit
GGACTACAAGGGTATCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC560.11639507815098105No Hit
GGACTACACGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC560.11639507815098105No Hit
GGACTACAGGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC560.11639507815098105No Hit
GGACTACAAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA560.11639507815098105No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA540.11223811107416029No Hit
GGACTACCGGGGTATCTAATCGTTTTCGATACCCTCACCTTCGTTCTTGA540.11223811107416029No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA530.11015962753574993No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA530.11015962753574993No Hit
GGACTACCAGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC520.10808114399733955No Hit
GGACTACCCGGGTTTCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC500.10392417692051878No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA490.10184569338210842No Hit
GGACTACCAGGGTATCTAATCCCAGTTTGGGTCTTAGCTATTGTGTGTTC490.10184569338210842No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA490.10184569338210842No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA490.10184569338210842No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)