FastQCFastQC Report
Tue 7 May 2024
EGAF00004969385

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969385
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73130
Total Bases17.4 Mbp
Sequences flagged as poor quality0
Sequence length239
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACGGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA32084.38670860112129No Hit
GGACTACGGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA25213.447285655681663No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA23753.2476411869273893No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA23303.1861069328592917No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA21872.9905647477095583No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA21582.9509093395323394No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA21352.9194584985642007No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA20992.8702310953097223No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA19942.7266511691508275No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA19322.64187064132367No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA19032.6022152331464516No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA17922.4504307397784766No Hit
GGACTACACGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA17382.3765896348967592No Hit
GGACTACTAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA16732.2877068234650624No Hit
GGACTACTGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA16472.2521536988923834No Hit
GGACTACGAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA16002.1878845890879255No Hit
GGACTACTCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA15682.144126897306167No Hit
GGACTACGCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA15572.1290851907561876No Hit
GGACTACCGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA15062.05934636947901No Hit
GGACTACAGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA14621.9991795432790922No Hit
GGACTACCAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA14291.9540544236291535No Hit
GGACTACAAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA13691.872008751538356No Hit
GGACTACACGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA12361.6901408450704223No Hit
GGACTACGGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA12161.6627922877068233No Hit
GGACTACCCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA11961.6354437303432243No Hit
GGACTACGGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA9301.2717079174073567No Hit
GGACTACTAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA8341.1404348420620813No Hit
GGACTACTGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA8221.1240257076439217No Hit
GGACTACGCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA8171.117188568303022No Hit
GGACTACTCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7971.0898400109394228No Hit
GGACTACGAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7861.0747983043894433No Hit
GGACTACCGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7250.9913852044304663No Hit
GGACTACAAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7060.9654040749350471No Hit
GGACTACCAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7030.9613017913305074No Hit
GGACTACCCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA6720.9189115274169287No Hit
GGACTACAGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA6420.8778886913715301No Hit
GGACTACACGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA5960.8149870094352523No Hit
GGACTACTCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA5760.7876384520716533No Hit
GGACTACTGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA5760.7876384520716533No Hit
GGACTACTAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA5640.7712293176534938No Hit
GGACTACGCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA5590.7643921783125941No Hit
GGACTACGAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA5390.7370436209489949No Hit
GGACTACCGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA5220.7137973471899357No Hit
GGACTACCAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA4990.6823465062217968No Hit
GGACTACAGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA4870.6659373718036374No Hit
GGACTACCCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA4790.6549979488581977No Hit
GGACTACACGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA4610.6303842472309586No Hit
GGACTACAAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA4510.616709968549159No Hit
GGACTACGGGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA3730.5100505948311227No Hit
GGACTACTAGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2980.40749350471762613No Hit
GGACTACTGGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2850.38971694243128674No Hit
GGACTACGGGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2810.38424723095856694No Hit
GGACTACTCGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2780.3801449473540271No Hit
GGACTACCGGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2540.34732667851770815No Hit
GGACTACGCGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2460.33638725557226856No Hit
GGACTACAAGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2400.32818268836318887No Hit
GGACTACCAGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2400.32818268836318887No Hit
GGACTACAGGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2380.3254478326268289No Hit
GGACTACGAGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2360.322712976890469No Hit
GGACTACCCGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2150.29399699165869No Hit
GGACTACGCGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2050.28032271297689043No Hit
GGACTACACGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2030.2775878572405306No Hit
GGACTACTAGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1970.26938329003145084No Hit
GGACTACTCGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1880.25707643921783124No Hit
GGACTACTGGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1840.25160672774511145No Hit
GGACTACCGGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1760.24066730479967183No Hit
GGACTACCAGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1620.22152331464515246No Hit
GGACTACGAGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1570.2146861753042527No Hit
GGACTACAAGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1530.20921646383153292No Hit
GGACTACAGGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1530.20921646383153292No Hit
GGACTACCCGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1400.1914399015451935No Hit
GGACTACACGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1380.18870504580883357No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)