FastQCFastQC Report
Tue 7 May 2024
EGAF00004969433

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969433
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7643
Total Bases1.8 Mbp
Sequences flagged as poor quality0
Sequence length239
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACTAGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA1922.5121025775219152No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA1842.4074316367918356No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA1521.9887478738715165No Hit
GGACTACTCGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA1461.9102446683239565No Hit
GGACTACAAGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA1461.9102446683239565No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA1461.9102446683239565No Hit
GGACTACTAGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA1341.753238257228837No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA1321.727070522046317No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA1221.5962318461337173No Hit
GGACTACTGGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA1171.5308125081774173No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA1161.5177286405861574No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA1091.4261415674473374No Hit
GGACTACGAGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA1081.4130576998560775No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA1031.3476383618997776No Hit
GGACTACTCGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA1021.3345544943085177No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA1021.3345544943085177No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA1001.3083867591259977No Hit
GGACTACACGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA1001.3083867591259977No Hit
GGACTACCAGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA961.2560512887609576No Hit
GGACTACCCGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA931.216799685987178No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA921.2037158183959178No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA901.177548083213398No Hit
GGACTACAAGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA901.177548083213398No Hit
GGACTACAGGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA891.164464215622138No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA861.125212612848358No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA861.125212612848358No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA851.112128745257098No Hit
GGACTACTGGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA791.0336255397095382No Hit
GGACTACCGGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA750.9812900693444984No Hit
GGACTACGGGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA740.9682062017532381No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA730.9551223341619782No Hit
GGACTACCAGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA720.9420384665707182No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA710.9289545989794583No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA710.9289545989794583No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA700.9158707313881983No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA690.9027868637969384No Hit
GGACTACACGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA660.8635352610231585No Hit
GGACTACGAGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA660.8635352610231585No Hit
GGACTACGCGGGTTTCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA640.8373675258406386No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA640.8373675258406386No Hit
GGACTACCGGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA640.8373675258406386No Hit
GGACTACAGGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA600.7850320554755985No Hit
GGACTACCCGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA560.7326965851105587No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA530.6934449823367788No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA520.6803611147455189No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA510.6672772471542588No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA480.6280256443804788No Hit
GGACTACGCGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA470.6149417767892189No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA460.6018579091979589No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA420.549522438832919No Hit
GGACTACTAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA400.523354703650399No Hit
GGACTACGGGGGTATCTAATCGTCTTCGAACCTCCGACTTTCGTTCTTGA390.5102708360591391No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA390.5102708360591391No Hit
GGACTACTGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA370.48410310087661906No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA370.48410310087661906No Hit
GGACTACTCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA360.4710192332853591No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA350.45793536569409915No Hit
GGACTACACGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA330.43176763051157924No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA330.43176763051157924No Hit
GGACTACAAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA320.4186837629203193No Hit
GGACTACAGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA300.39251602773779926No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA270.3532644249640194No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA260.34018055737275943No Hit
GGACTACACGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA250.3270966897814994No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA250.3270966897814994No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA240.3140128221902394No Hit
GGACTACGCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA230.30092895459897945No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA230.30092895459897945No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA210.2747612194164595No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA200.2616773518251995No Hit
GGACTACGAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA200.2616773518251995No Hit
GGACTACCGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA200.2616773518251995No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA180.23550961664267955No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA170.2224257490514196No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA170.2224257490514196No Hit
GGACTACCAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA170.2224257490514196No Hit
GGACTACTCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA170.2224257490514196No Hit
GGACTACTAGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCA160.20934188146015964No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA160.20934188146015964No Hit
GGACTACGGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA160.20934188146015964No Hit
GGACTACCCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA150.19625801386889963No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA150.19625801386889963No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA150.19625801386889963No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA150.19625801386889963No Hit
GGACTACTAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA140.18317414627763967No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA130.17009027868637971No Hit
GGACTACTGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA130.17009027868637971No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA130.17009027868637971No Hit
GGACTACTAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA130.17009027868637971No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA130.17009027868637971No Hit
GGACTACCAGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCA120.1570064110951197No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA120.1570064110951197No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA120.1570064110951197No Hit
GGACTACAAGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCA120.1570064110951197No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA120.1570064110951197No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA120.1570064110951197No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA110.14392254350385975No Hit
GGACTACGAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA110.14392254350385975No Hit
GGACTACAAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA110.14392254350385975No Hit
GGACTACAAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA110.14392254350385975No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA110.14392254350385975No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA110.14392254350385975No Hit
GGACTACAGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA100.13083867591259976No Hit
GGACTACAAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCA100.13083867591259976No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA100.13083867591259976No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA100.13083867591259976No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA100.13083867591259976No Hit
GGACTACCAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCA100.13083867591259976No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA100.13083867591259976No Hit
GGACTACTGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA100.13083867591259976No Hit
GGACTACCAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA100.13083867591259976No Hit
GGACTACCCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA100.13083867591259976No Hit
GGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCA100.13083867591259976No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA100.13083867591259976No Hit
GGACTACGAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCA90.11775480832133978No Hit
GGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCA90.11775480832133978No Hit
GGACTACTCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA90.11775480832133978No Hit
GGACTACACGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA90.11775480832133978No Hit
GGACTACACGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA90.11775480832133978No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA90.11775480832133978No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA90.11775480832133978No Hit
GGACTACCAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA90.11775480832133978No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA80.10467094073007982No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA80.10467094073007982No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA80.10467094073007982No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA80.10467094073007982No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA80.10467094073007982No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA80.10467094073007982No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA80.10467094073007982No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA80.10467094073007982No Hit
GGACTACTAGGGTTTCTAATCCTGTTCGCTCCCCATGCTTTCGCTCCTCA80.10467094073007982No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA80.10467094073007982No Hit
GGACTACCGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCA80.10467094073007982No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCATGCTTTCGTACCTCA80.10467094073007982No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA80.10467094073007982No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA80.10467094073007982No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA80.10467094073007982No Hit
GGACTACAAGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA80.10467094073007982No Hit
GGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCATGCTTTCGCTCCTCA80.10467094073007982No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA80.10467094073007982No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA80.10467094073007982No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)