FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004969463

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969463
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63495
Sequences flagged as poor quality0
Sequence length239
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACTAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA30134.745255531931648No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA24213.8128986534372786No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA22913.6081581226868256No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA19413.0569336168202224No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA17212.7104496417040713No Hit
GGACTACTAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA17142.699425151586739No Hit
GGACTACTAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA17092.6915505157886446No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA16432.5876053232537997No Hit
GGACTACACGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA15592.4553114418458146No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA14772.3261674147570672No Hit
GGACTACTCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA14052.212772659264509No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA14032.2096228049452713No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA13412.1119773210489017No Hit
GGACTACTCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA13392.108827466729664No Hit
GGACTACTGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA13082.060004724781479No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA12611.9859831482793922No Hit
GGACTACTGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA12041.8962123001811166No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA12021.893062445861879No Hit
GGACTACAAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA11231.7686432002519883No Hit
GGACTACAAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA10911.7182455311441847No Hit
GGACTACGAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA10211.6080006299708638No Hit
GGACTACCAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA9861.5528781793842035No Hit
GGACTACCAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA9561.5056303645956375No Hit
GGACTACTAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA9091.4316087880935506No Hit
GGACTACACGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA8941.4079848806992676No Hit
GGACTACACGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA8781.3827860461453658No Hit
GGACTACGAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA8721.3733364831876527No Hit
GGACTACGCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA8311.308764469643279No Hit
GGACTACAGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA8161.285140562248996No Hit
GGACTACAGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7781.225293330183479No Hit
GGACTACGGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA7671.2079691314276715No Hit
GGACTACGGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7501.1811953697141508No Hit
GGACTACTCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7461.1748956610756751No Hit
GGACTACCGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA7391.1638711709583431No Hit
GGACTACGCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA7341.1559965351602488No Hit
GGACTACTGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA6991.1008740845735885No Hit
GGACTACCCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA6991.1008740845735885No Hit
GGACTACCGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA6971.0977242302543508No Hit
GGACTACCCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA6941.0929994487754942No Hit
GGACTACAAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA5990.9433813686117016No Hit
GGACTACCAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA5390.8488857390345695No Hit
GGACTACGAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA5050.7953382156075282No Hit
GGACTACACGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA4560.7181667847862037No Hit
GGACTACGGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA4340.6835183872745886No Hit
GGACTACAGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA4290.6756437514764942No Hit
GGACTACGCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA4250.6693440428380187No Hit
GGACTACTAGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA4140.6520198440822111No Hit
GGACTACCCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA3900.6142215922513584No Hit
GGACTACCGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA3900.6142215922513584No Hit
GGACTACTCGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA3490.5496495787069848No Hit
GGACTACTGGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2920.4598787306087093No Hit
GGACTACAAGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2800.44097960469328296No Hit
GGACTACCAGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2510.39530671706433584No Hit
GGACTACTAGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2390.37640759114890937No Hit
GGACTACGAGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2330.36695802819119616No Hit
GGACTACACGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2230.35120875659500744No Hit
GGACTACGGGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA2040.321285140562249No Hit
GGACTACAGGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1920.3023860146468226No Hit
GGACTACTCGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1900.2992361603275848No Hit
GGACTACCGGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1880.2960863060083471No Hit
GGACTACTGGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1810.28506181589101504No Hit
GGACTACCCGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1730.2724623986140641No Hit
GGACTACGCGGGTTTCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1730.2724623986140641No Hit
GGACTACAAGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1530.24096385542168677No Hit
GGACTACCAGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1400.22048980234664148No Hit
GGACTACGAGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1210.19056618631388297No Hit
GGACTACGGGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1160.18269155051578864No Hit
GGACTACAGGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1150.18111662335616976No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA1110.1748169147176943No Hit
GGACTACACGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1080.1700921332388377No Hit
GGACTACCGGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1070.16851720607921883No Hit
GGACTACCCGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA1040.16379242460036222No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA1030.16221749744074337No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA1000.15749271596188677No Hit
GGACTACGCGGGTATCTAATCGTTTTCGATACCCTAACCTTCGTTCTTGA980.15434286164264902No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA900.14174344436569808No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA810.1275690999291283No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA730.11496968265217733No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA720.11339475549255847No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA700.11024490117332074No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA690.10866997401370188No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGTACCTCA670.10552011969446413No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA640.10079533821560753No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)