FastQCFastQC Report
Tue 7 May 2024
EGAF00004969473

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969473
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53062
Total Bases12.6 Mbp
Sequences flagged as poor quality0
Sequence length239
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA22484.236553465757039No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA18473.4808337416606987No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA17523.30179789679997No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA16653.137838754664355No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA16153.0436093626323926No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA16113.0360710112698355No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA15852.987071727413215No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA15432.907919038106366No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA15242.8721118691342205No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA13662.5743469903132183No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA13052.459387132034224No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA13022.4537333685123066No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA12552.3651577400022616No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA12362.329350571030116No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA11932.248313293882628No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA11692.203083185707286No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA11262.122045908559798No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA11142.0994308544721267No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA10341.9486638272209866No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA9761.83935773246391No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA9311.754551279635144No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA9041.7036674079378837No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA8721.6433605970374279No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA8051.517093211714598No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA6601.2438279748219065No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA5381.0139082582639176No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA5351.0082544947419998No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA4780.9008329878255625No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA4690.8838716972598092No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA4630.8725641702159738No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA4410.8311032377219103No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA4330.8160265349967962No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA4280.8066035957935999No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA4230.7971806565904037No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA4040.761373487618258No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA3890.7331046700086691No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA3770.710489615920998No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA3560.6709132712675737No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA3370.635106102295428No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA3240.6106064603671177No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA3240.6106064603671177No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA3210.6049526968451999No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA3140.5917605819607252No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA2950.5559534129885794No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA2680.5050695412913195No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA2630.4956466020881233No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA2390.45041649391278127No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA2350.44287814255022423No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA600.11307527043835514No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA540.10176774339451962No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)