FastQCFastQC Report
Wed 8 May 2024
EGAF00004969481

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969481
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78973
Total Bases18.8 Mbp
Sequences flagged as poor quality0
Sequence length239
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACTAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA30483.8595469337621715No Hit
GGACTACAAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA26493.354310967039368No Hit
GGACTACTGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA24433.0934623225659403No Hit
GGACTACTCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA22432.84021121142669No Hit
GGACTACGAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA21522.7249819558583313No Hit
GGACTACTAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA21122.6743317336304813No Hit
GGACTACCAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA20882.6439416002937715No Hit
GGACTACAGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA20602.608486444734276No Hit
GGACTACAAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA19362.451470755827941No Hit
GGACTACACGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA19332.4476719891608525No Hit
GGACTACGGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA18962.400820533600091No Hit
GGACTACTGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA16952.1463031669051444No Hit
GGACTACGAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA16072.034872678003875No Hit
GGACTACGCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA15071.9082471224342497No Hit
GGACTACCAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA15061.9069808668785535No Hit
GGACTACCGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA15051.9057146113228574No Hit
GGACTACTCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA14991.8981170779886796No Hit
GGACTACAGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA14721.8639281779848809No Hit
GGACTACGGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA14141.7904853557544984No Hit
GGACTACACGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA13611.7233738113025971No Hit
GGACTACCCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA13411.6980487001886722No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA11921.5093766223899308No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA11421.4460638446051182No Hit
GGACTACGCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA11271.4270700112696746No Hit
GGACTACCGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA10721.3574259557063806No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA9791.2396641890266293No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA9551.2092740556899193No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA8991.1383637445709294No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA8961.1345649779038407No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA8851.1206361667911817No Hit
GGACTACCCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA8431.0674534334519392No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA8221.040862066782318No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA8001.0130044445570006No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA7840.9927443556658606No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA7580.9598217112177578No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA6710.8496574778721842No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA6700.8483912223164879No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA6640.8407936889823103No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA6540.8281311334253478No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA6380.8078710445342079No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA5840.7394932445266104No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA5690.7204994111911666No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA5390.6825117445202791No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA5280.6685829334076203No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA5170.6546541222949616No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA4380.5546199333949577No Hit
GGACTACTAGGGTTTCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA4250.5381586111709066No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA4150.5254960556139441No Hit
GGACTACAAGGGTTTCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA3790.4799108556088789No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA3480.44065693338229517No Hit
GGACTACTCGGGTTTCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA3470.4393906778265989No Hit
GGACTACCAGGGTTTCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA3310.41913058893545896No Hit
GGACTACTAGGGTATCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA3140.3976042444886227No Hit
GGACTACAGGGGTTTCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA3140.3976042444886227No Hit
GGACTACTGGGGTTTCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA3030.38367543337596394No Hit
GGACTACGAGGGTTTCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA2970.37607790004178643No Hit
GGACTACACGGGTTTCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA2840.35961657781773515No Hit
GGACTACGGGGGTTTCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA2770.35075278892786144No Hit
GGACTACAAGGGTATCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA2710.3431552555936839No Hit
GGACTACGCGGGTTTCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA2430.3077001000341889No Hit
GGACTACTGGGGTATCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA2420.30643384447849265No Hit
GGACTACTCGGGTATCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA2280.28870626669874516No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA2160.27351120003039014No Hit
GGACTACCAGGGTATCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA2150.2722449444746939No Hit
GGACTACGAGGGTATCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA2130.2697124333633014No Hit
GGACTACAGGGGTATCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA2110.2671799222519089No Hit
GGACTACCGGGGTTTCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA2050.2595823889177314No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2000.25325111113925014No Hit
GGACTACGGGGGTATCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA1900.2405885555822876No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1870.23678978891519883No Hit
GGACTACCGGGGTATCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA1870.23678978891519883No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1870.23678978891519883No Hit
GGACTACCCGGGTTTCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA1810.22919225558102135No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1720.2177959555797551No Hit
GGACTACACGGGTATCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA1710.21652970002405883No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1710.21652970002405883No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1670.21146467780127384No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1660.21019842224557758No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1620.2051334000227926No Hit
GGACTACGCGGGTATCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA1620.2051334000227926No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1560.19753586668861509No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1550.19626961113291883No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1480.18740582224304508No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1470.18613956668734882No Hit
GGACTACTAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1460.1848733111316526No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1460.1848733111316526No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1450.18360705557595633No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1410.17854203335317134No Hit
GGACTACTGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1380.1747432666860826No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1370.17347701113038633No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1320.16714573335190508No Hit
GGACTACCCGGGTATCTAATCCTTATTGCTACCCAAGCCTTCGTCCCTCA1280.1620807111291201No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1240.15701568890633508No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1230.15574943335063882No Hit
GGACTACACGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1220.15448317779494258No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1210.15321692223924632No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1210.15321692223924632No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1190.15068441112785383No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1190.15068441112785383No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1160.14688564446076507No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1150.14561938890506881No Hit
GGACTACAAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1140.14435313334937258No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1100.13928811112658757No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA1080.13675560001519507No Hit
GGACTACGAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1030.13042432223671382No Hit
GGACTACCAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1020.12915806668101756No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1020.12915806668101756No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1010.12789181112532133No Hit
GGACTACAGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA990.1253593000139288No Hit
GGACTACACGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA990.1253593000139288No Hit
GGACTACTCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA990.1253593000139288No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA930.1177617666797513No Hit
GGACTACGGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA860.10889797778987755No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA840.10636546667848505No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA810.1025667000113963No Hit
GGACTACGCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA790.10003418890000379No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)