FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004969509

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969509
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences434
Sequences flagged as poor quality0
Sequence length239
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA337.603686635944701No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA306.912442396313365No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA265.990783410138248No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA245.529953917050691No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA225.0691244239631335No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA225.0691244239631335No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA214.838709677419355No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA194.377880184331797No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA173.9170506912442393No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA163.686635944700461No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA163.686635944700461No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA143.225806451612903No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA143.225806451612903No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA143.225806451612903No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA143.225806451612903No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA132.995391705069124No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA132.995391705069124No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA132.995391705069124No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA122.7649769585253456No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA122.7649769585253456No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA112.5345622119815667No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA112.5345622119815667No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA112.5345622119815667No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA102.3041474654377883No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCCCA10.2304147465437788No Hit
GGACTACCGGGGTTTCCAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA10.2304147465437788No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCCCA10.2304147465437788No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACACTTTCGCACCTCA10.2304147465437788No Hit
GGACTACGAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA10.2304147465437788No Hit
GGACTACACGGGTATCTAATCCTGTTTGACCCCCACGCTTTCGCACATCA10.2304147465437788No Hit
GGTCTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA10.2304147465437788No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA10.2304147465437788No Hit
GGACTACTAGAGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA10.2304147465437788No Hit
GGACTACCCAGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA10.2304147465437788No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACACTTTCGCACCTCA10.2304147465437788No Hit
GGACTACTGGGGTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCAG10.2304147465437788No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTCTCGCACCTCA10.2304147465437788No Hit
GGAACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTC10.2304147465437788No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCCCA10.2304147465437788No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCGCGCTTTCGCACCTCA10.2304147465437788No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCA10.2304147465437788No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTCCGCACCTCA10.2304147465437788No Hit
GGACTACAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCAG10.2304147465437788No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACTTCA10.2304147465437788No Hit
GGACTACGCGGGTATCTAATCCTGCTTGCTCCCCACGCTTTCGCACCTCA10.2304147465437788No Hit
GGACTACTCTGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA10.2304147465437788No Hit
GGACTAACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCAG10.2304147465437788No Hit
GGACTACTGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA10.2304147465437788No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGCGCTTCA10.2304147465437788No Hit
GGACTACGGGGGTTTCTAATCCTGTTTACTCCCCACGCTTTCGCACCTCA10.2304147465437788No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)