FastQCFastQC Report
Wed 8 May 2024
EGAF00004969561

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969561
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99791
Total Bases23.8 Mbp
Sequences flagged as poor quality0
Sequence length239
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACTAGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA52545.265003858063352No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA46304.63969696666032No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA46004.6096341353428665No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA43534.3621168241625No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA42184.226834083233959No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA39003.908168071268952No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA38523.8600675411610266No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA37393.7468308765319516No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA35683.575472738022467No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA35643.571464360513473No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA34743.4812758665611128No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA34663.4732591115431246No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA33693.3760559569500255No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA32123.218727139722019No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA30623.0684129831347517No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA29442.9501658466194347No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA29062.9120862602839934No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA27622.767784669960217No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA27382.743734404906254No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA26052.61045585273221No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA25892.594422342696235No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA24832.4882003387078995No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA24732.478179394935415No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA20982.1023940034672464No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA5670.5681875118998707No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA5230.524095359300939No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA5080.5090639436422123No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA4680.4689801685522742No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA4430.443927809121063No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA4420.4429257147438146No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3990.3998356565221312No Hit
GGACTACTGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3810.38179795773165914No Hit
GGACTACTAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3790.37979376897716227No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3770.3777895802226654No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3580.3587497870549448No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3570.35774769267769635No Hit
GGACTACACGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3480.34872884328246034No Hit
GGACTACTCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3380.3387078995099759No Hit
GGACTACGGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3230.32367648385124914No Hit
GGACTACGAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3060.3066408794380255No Hit
GGACTACAAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3040.30463669068352855No Hit
GGACTACCAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3010.3016304075517833No Hit
GGACTACTAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA3010.3016304075517833No Hit
GGACTACACGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2920.2926115581565472No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2870.2876010862703049No Hit
GGACTACCGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2840.2845948031385596No Hit
GGACTACGCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2630.26355082121634216No Hit
GGACTACAGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2600.2605445380845968No Hit
GGACTACTGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA2590.25954244370734836No Hit
GGACTACGGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA2550.25553406619835456No Hit
GGACTACAAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA2530.2535298774438577No Hit
GGACTACTCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA2520.2525277830666092No Hit
GGACTACCCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2160.21645238548566506No Hit
GGACTACCAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA2020.20242306420418676No Hit
GGACTACGAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1960.19641049794069604No Hit
GGACTACTAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1950.19540840356344757No Hit
GGACTACGGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1940.19440630918619917No Hit
GGACTACAGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1890.1893958372999569No Hit
GGACTACTCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1820.18238117665921777No Hit
GGACTACACGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1790.1793748935274724No Hit
GGACTACGCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1780.17837279915022397No Hit
GGACTACCGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1770.17737070477297553No Hit
GGACTACTGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1620.1623392891142488No Hit
GGACTACCAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1550.15532462847350964No Hit
GGACTACAAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1490.14931206221001894No Hit
GGACTACAGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1460.1463057790782736No Hit
GGACTACCCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1450.14530368470102514No Hit
GGACTACGAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1350.13528274092854065No Hit
GGACTACACGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1280.12826808028780148No Hit
GGACTACCGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1240.1242597027788077No Hit
GGACTACGCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1210.12125341964706235No Hit
GGACTACCCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1050.10521990961108717No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)