FastQCFastQC Report
Tue 7 May 2024
EGAF00004969567

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969567
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1660
Total Bases396.7 kbp
Sequences flagged as poor quality0
Sequence length239
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACCGCGGCTGCTGACACGAAACTCCACCAAGATCGGAAGAGCACA17010.240963855421686No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA784.698795180722891No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA704.216867469879518No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA613.6746987951807233No Hit
GGACTACCGCGGCGGCTGACACGAAACTCCACCAAGATCGGAAGAGCACA593.5542168674698797No Hit
GGACTACCGGGGTTTCTGACACGAAACTCCACCAAGATCGGAAGAGCACA553.313253012048193No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA543.2530120481927707No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA533.1927710843373496No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA513.072289156626506No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA462.7710843373493974No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA462.7710843373493974No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA462.7710843373493974No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA412.4698795180722892No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA402.4096385542168677No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA402.4096385542168677No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA402.4096385542168677No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA402.4096385542168677No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA382.289156626506024No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA382.289156626506024No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA362.1686746987951806No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA362.1686746987951806No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA352.108433734939759No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA331.9879518072289155No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA311.8674698795180724No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA291.746987951807229No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA261.566265060240964No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA191.144578313253012No Hit
GGACTACCGGGGCTGCTGACACGAAACTCCACCAAGATCGGAAGAGCACA70.42168674698795183No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA60.3614457831325301No Hit
GGACTACCGCGGCTGCTGACACGCAACTCCACCAAGATCGGAAGAGCACA60.3614457831325301No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA50.30120481927710846No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA50.30120481927710846No Hit
GGACTACCCGGCTGCTGACACGAAACTCCACCAAGATCGGAAGAGCACAC40.24096385542168677No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA40.24096385542168677No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA40.24096385542168677No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA30.18072289156626506No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA30.18072289156626506No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA30.18072289156626506No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA30.18072289156626506No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA30.18072289156626506No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA30.18072289156626506No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCTTCA30.18072289156626506No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA30.18072289156626506No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA30.18072289156626506No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA30.18072289156626506No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA30.18072289156626506No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCTTCA30.18072289156626506No Hit
GGACTACCGCGGCTGCTGACACGAACCTCCACCAAGATCGGAAGAGCACA30.18072289156626506No Hit
GGACTACAAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCGCTTTA20.12048192771084339No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA20.12048192771084339No Hit
GGACTACTCGGGTTTCTAATCCTGTTTACCGCGGCGGCTGGCACGAAACT20.12048192771084339No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA20.12048192771084339No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTGA20.12048192771084339No Hit
GGACTACCGCGGCTGCTGACACGACACTCCACCAAGATCGGAAGAGCACA20.12048192771084339No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA20.12048192771084339No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA20.12048192771084339No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA20.12048192771084339No Hit
GGACTACCGCGGCTGCTGACACGAAACTCCACCCAGATCGGAAGAGCACA20.12048192771084339No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA20.12048192771084339No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCTTCA20.12048192771084339No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA20.12048192771084339No Hit
GGACTACCCGGGTTTCTAATCCTGTTTACCGCGGCGGCTGACACGAAACT20.12048192771084339No Hit
GGACTACAGGGGTATCTAATCCTGTTTACCGCGGCGGCTGACACGAAACT20.12048192771084339No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA20.12048192771084339No Hit
GGACTACCGCGGCGGCTGACACGAACCTCCACCAAGATCGGAAGAGCACA20.12048192771084339No Hit
GGACTACGTGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA20.12048192771084339No Hit
GGACTACCGCGGCTGCTGACACGAAACTCCACCAAGATCGGAAAGCACAC20.12048192771084339No Hit
GGACTACACGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA20.12048192771084339No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA20.12048192771084339No Hit
GGACTACCGGGGTTTCTGACCCGAAACTCCACCAAGATCGGAAGAGCACA20.12048192771084339No Hit
GGACTACCGGGCTGCTGACACGAAACTCCACCAAGATCGGAAGAGCACAC20.12048192771084339No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA20.12048192771084339No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA20.12048192771084339No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA20.12048192771084339No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA20.12048192771084339No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA20.12048192771084339No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA20.12048192771084339No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA20.12048192771084339No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA20.12048192771084339No Hit
GGACTACCGCGGCTGCTGGCACGAAACTCCACCAAGATCGGAAGAGCACA20.12048192771084339No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)