FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004969576

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969576
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences379
Sequences flagged as poor quality0
Sequence length239
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC11430.07915567282322No Hit
GTGTCAGCCGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC7519.788918205804748No Hit
GTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC5213.720316622691293No Hit
GTGCCAGCCGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC3810.026385224274406No Hit
GTGTCAGCAGCCGCGGTAATACCGAGGGTGCAAGCGTTAATCGGAATTAC143.6939313984168867No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGAGCTAGCGTTATTCGGAATTAC133.430079155672823No Hit
GTGCCAGCAGCCGCGGTAATACGGAGGGAGCTAGCGTTATTCGGAATTAC92.3746701846965697No Hit
GTGTCAGCCGCCGCGGTAATACGGAGGGAGCTAGCGTTATTCGGAATTAC51.3192612137203166No Hit
GTGCCAGCCGCCGCGGTAATACCGAGGGTGCAAGCGTTAATCGGAATTAC41.0554089709762533No Hit
GTGCCAGCCGCCGCGGTAATACGGAGGGAGCTAGCGTTATTCGGAATTAC41.0554089709762533No Hit
GTGTCAGCCGCCGCGGTAGTCCGTACAAGAGTGAAGATCGGAAGAGCGTC30.79155672823219No Hit
GTGTCAGCCGCCGCGGTAATACCGAGGGTGCAAGCGTTAATCGGAATTAC20.5277044854881267No Hit
GTGTCAGCAGCCGCGGTAATTAGATACCCCTGTAGTCCGTACAAGAGTGA20.5277044854881267No Hit
GTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC20.5277044854881267No Hit
GTGTCAGCAGCCGCGGTAATTAGAAACCCTAGTAGTCCGTACAAGAGTGA20.5277044854881267No Hit
GTGCCAGCAGCCGCGGTAATACCGAGGGTGCAAGCGTTAATCGGAATTAC20.5277044854881267No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGGGCGAGCGTTACCCGCAATCAC10.2638522427440633No Hit
GTGTCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCGGATTTAT10.2638522427440633No Hit
GTGTCAGCCCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTACT10.2638522427440633No Hit
GTGTCAGCAGCCGCGGTAATTAGATACCCTTGTAGTCCGTACAAGAGTGA10.2638522427440633No Hit
GTGTCAGCAGCCGCGGTAATTAGATACCCCAGTAGTCCGTACAAGAGTGA10.2638522427440633No Hit
GTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAAGTAC10.2638522427440633No Hit
GTGCCAGCCGCCGCGGTAATTAGAAACCCCGGTAGTCCGTACAAGAGTGA10.2638522427440633No Hit
GTGTCAGCAGCCGCGGTAATTAGATACCCTAGTAGTCCGTACAAGAGTGA10.2638522427440633No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCGGATTTAT10.2638522427440633No Hit
GTGTCAGCAGCCGCGGTAGTCCGTACAAGAGTGAAGATCGGAAGAGCGTC10.2638522427440633No Hit
GTGTCAGCAGCCGCGGTAATTAGAAACCCGAGTAGTCCGTACAAGAGTGA10.2638522427440633No Hit
TTGTCTGCAGCCTCTCTACTCCGGAAGATGCAAGCGTTCCTCGGACGTGC10.2638522427440633No Hit
GTGCCAGCCGCCGCGGTAATTAGAAACCCCCGTAGTCCGTACAAGAGTGA10.2638522427440633No Hit
GTGTCAGCAGCCGCGGTAATTAGAAACCCCAGTAGTCCGTACAAGAGTGA10.2638522427440633No Hit
GTGTCAGCAGCCGCGGTAATTAGAAACCCCCGTAGTCCGTACAAGAGTGA10.2638522427440633No Hit
GTGCCAGCAGCCGCGGTAATTAGAAACCCCCGTAGTCCGTACAAGAGTGA10.2638522427440633No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC10.2638522427440633No Hit
GTGCCAGCAGCCGCGGTAATACGGAGGGCGCTAGCGTTATTCGGAATTAC10.2638522427440633No Hit
GTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGATTTAT10.2638522427440633No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC10.2638522427440633No Hit
GTGTCAGCCGCCGCGGTAATTAGAAACCCTAGTAGTCCGTACAAGAGTGA10.2638522427440633No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGTTGCAAGCGTTAATCGGAATTAT10.2638522427440633No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTAC10.2638522427440633No Hit
GTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATCAC10.2638522427440633No Hit
GTGCCAGCAGCCGCGGTGATACAGAGGGTGCAAGCGTTAATCGGAATTAC10.2638522427440633No Hit
GTGCCAGCAGCCGCGGTAATTAGAAACCCCTGTAGTCCGTACAAGAGTGA10.2638522427440633No Hit
GTGTCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTAC10.2638522427440633No Hit
GTGCCAGCAGCCGCGGTAATTAGAAACCCTTGTAGTCCGTACAAGAGTGA10.2638522427440633No Hit
GTGTCAGCAGCCGCGGTAATTAGATACCCGCGTAGTCCGTACAAGAGTGA10.2638522427440633No Hit
GTGTCAGCAGCCGCGGTAATACAGGGGGTGCAAGCGTTAATCGGAATTAC10.2638522427440633No Hit
GTGCCAGCCGCCGCGGTAATACCGAGGATGCAAGCGTTAATCGGAATTAC10.2638522427440633No Hit
GTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGAATTAT10.2638522427440633No Hit
GTGCCAGCAGCCGCGGTAATTAGAAACCCTAGTAGTCCGTACAAGAGTGA10.2638522427440633No Hit
GTGCCAGCAGCCGCGGTAATTAGAAACCCGTGTACTCCGTACGAGAGTGA10.2638522427440633No Hit
GTGCCAGCCGCCGCGGTAATTAGATACCCTAGTAGTCCGTACAAGAGTGA10.2638522427440633No Hit
GTGTCAGCCGCCGCGGTAATCCTTACCCGCGTGACGCTCGGCAGAGCGTC10.2638522427440633No Hit
GTGTCAGCCGCCGCGGTAGTCCGTACAATGGTGAAGATCGTCAGAGCGTC10.2638522427440633No Hit
GTGTCAGCCGCCGCGCTAATACGGAGGGAGCTAGCGTTATTCGGAATTAC10.2638522427440633No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)