FastQCFastQC Report
Tue 7 May 2024
EGAF00004969577

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969577
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences379
Total Bases90.5 kbp
Sequences flagged as poor quality0
Sequence length239
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA225.804749340369393No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA225.804749340369393No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA205.277044854881266No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA205.277044854881266No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA195.013192612137203No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA184.749340369393139No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA184.749340369393139No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA153.95778364116095No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA143.6939313984168867No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA143.6939313984168867No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA143.6939313984168867No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA133.430079155672823No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA133.430079155672823No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA133.430079155672823No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA123.16622691292876No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA123.16622691292876No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA112.9023746701846966No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA112.9023746701846966No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA102.638522427440633No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA102.638522427440633No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA92.3746701846965697No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA82.1108179419525066No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA82.1108179419525066No Hit
GGACTACCGCGGCGGCTGACACCCAAGCAACCTAAGATCGGAAGAGCACA41.0554089709762533No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA30.79155672823219No Hit
GGACTACTAGGGTTTCTAATTACCGCGGCTGCTGACACCCAAGCAACCTA20.5277044854881267No Hit
GGACTACAGGGGTATCTAATTACCGCGGCTGCTGACACCCAAGCAACCTA20.5277044854881267No Hit
GGACTACAGGGGTATCTAATCCTGTTTGTTCCCCACGCTTTCGCACCTCA10.2638522427440633No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA10.2638522427440633No Hit
GGACTACCAGGTTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA10.2638522427440633No Hit
GGACTATCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA10.2638522427440633No Hit
GGACTACTCGGGTTTCTAATTACCGCGGCTGCTGACACCCAAGCAACCTA10.2638522427440633No Hit
GGACTACCGGGGTTTCTAATTACCGCGGCGGCTGGCACCCAAGCAACCTA10.2638522427440633No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACACTTTCGCACCTCA10.2638522427440633No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCAACGCTTTCGCACCTCA10.2638522427440633No Hit
GGACTACAGGGGTTTCTAATTACCGCGGCTGCTGGCACCCAAGCAACCTA10.2638522427440633No Hit
GGACTACTCGGGTATCTAATCCTGTTTGTTCCCCACGCTTTCGCACCTCA10.2638522427440633No Hit
GGACTACTGGGGTTTCTAATCCGGTTCGCTCCCCTAGCTTTCGTGCCTCA10.2638522427440633No Hit
GGACTACTAGGGTTTCTAATTACCGCGGCGGCTGACACCCAAGCAACCTA10.2638522427440633No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCA10.2638522427440633No Hit
GGACTACTGGGGTTTCTAATTACCGCGGCTGCTGACACCCAAGCAACCTA10.2638522427440633No Hit
GGACTACTAGGGTTTCTAATTACCGCGGCTGCTGGCACCCAAGCAACCTA10.2638522427440633No Hit
GACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCAG10.2638522427440633No Hit
GGACTACGGGGGTTTCTAATTACCGCGGCTGCTGGCACCCAAGCAACCTA10.2638522427440633No Hit
GGACTACAAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCACCTCA10.2638522427440633No Hit
GGACTACACGGGTTTCTAATTACCTCCGCTGCTGGCACCCAAGCACCCTA10.2638522427440633No Hit
GGGCTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA10.2638522427440633No Hit
GGATACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCAG10.2638522427440633No Hit
GGACTACAAGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGTCCCTCA10.2638522427440633No Hit
GGACTACCGCGGCTGCTGACACCCAAGCAACCTAAGATCGGAAGAGCACA10.2638522427440633No Hit
GGACTACTGGGGTATCTAATTACCGCGGCTGCTGACACCCAAGCAACCTA10.2638522427440633No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAACCTCA10.2638522427440633No Hit
GGACTACAAGGGTTTCTAATTACCGCGGCTGCTGGCACCCAAGCAACCTA10.2638522427440633No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAACCTCA10.2638522427440633No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA10.2638522427440633No Hit
GGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGTCCCTCA10.2638522427440633No Hit
GGACTACAAGGGTATCTAATCACCGCGGCTGCTGACACCCAAGCAACCTA10.2638522427440633No Hit
GGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCACCTCA10.2638522427440633No Hit
GGACTACGGGGGTTTCTAATTACCGCGGCGGCTGGCACCCAAGCAACCTA10.2638522427440633No Hit
GGACTACTAGGGTATCTAATTACCGCGGCTGCTGACACCCAAGCAACCTA10.2638522427440633No Hit
GGACTACTAGGGTATCTAATTACCGCGGCGGCTGGCACCCAAGCAACCTA10.2638522427440633No Hit
GGACTACGGGGGTTTCTAATTACCGCGGCTGCTGACACCCAAGCAACCTA10.2638522427440633No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA10.2638522427440633No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA10.2638522427440633No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA10.2638522427440633No Hit
GGACTACTCGGGTTTCTAATCCCGTTCGCTCCCCTGGCTTTCGCGCCTCA10.2638522427440633No Hit
GGACTACCGCGGCTTCTTACCCCCCAGCACCCTCAGATCTTACGAGCCCA10.2638522427440633No Hit
GGACTACGCGGGTATCTAATTACCGCGGCTGCTGACACCCAAGCAACCTA10.2638522427440633No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACTCTTTCGCACCTCA10.2638522427440633No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)