FastQCFastQC Report
Tue 7 May 2024
EGAF00004969580

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969580
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1090
Total Bases260.5 kbp
Sequences flagged as poor quality0
Sequence length239
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC12111.100917431192661No Hit
GTGTCAGCCGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC10910.0No Hit
GTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC918.34862385321101No Hit
GTGCCAGCCGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC857.79816513761468No Hit
GTGTCAGCAGCCGCGGTAGTCCCAAGCCAAACCTAGATCGGAAGAGCGTC797.247706422018349No Hit
GTGTCAGAAACCCCGGTAGTCCCAAGCCAAACCTAGATCGGAAGAGCGTC353.211009174311927No Hit
GTGTCAGCAGCCGCGTAGTCCCAAGCCAAACCTAGATCGGAAGAGCGTCG211.926605504587156No Hit
GTGCCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATGAC201.834862385321101No Hit
GTGTCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATGAC191.743119266055046No Hit
GTGTCAGCCGCCGCGGTAGTCCCAAGCCAAACCTAGATCGGAAGAGCGTC181.651376146788991No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATGAC151.3761467889908259No Hit
GTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATGAC141.2844036697247707No Hit
GTGTCAGCCGCCGCGGTAATACGGAGGGAGCTAGCGTTGTTCGGAATTAC121.1009174311926606No Hit
GTGTCAGCCGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC121.1009174311926606No Hit
GTGTCAGCAGCCGCGGTAATACCGAGGGTGCAAGCGTTAATCGGAATTAC111.0091743119266057No Hit
GTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC111.0091743119266057No Hit
GTGTCAGCAGCCGGGTAGTCCCAAGCCAAACCTAGATCGGAAGAGCGTCG111.0091743119266057No Hit
GTGTCAGCCGCCGCGGTAATACCGAGGGTGCAAGCGTTAATCGGAATTAC111.0091743119266057No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC100.9174311926605505No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATCAC90.8256880733944955No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGAGCTAGCGTTGTTCGGAATTAC90.8256880733944955No Hit
GTGCCAGCCGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC90.8256880733944955No Hit
GTGCCAGCCGCCGCGGTAATACGGAGGGAGCTAGCGTTGTTCGGAATTAC80.7339449541284404No Hit
GTGCCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATCAC80.7339449541284404No Hit
GTGCCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATCAC80.7339449541284404No Hit
GTGCCAGCCGCCGCGGTAATACCGAGGGTGCAAGCGTTAATCGGAATTAC70.6422018348623854No Hit
GTGTCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATTAC70.6422018348623854No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTGTCCGGAATTAC60.5504587155963303No Hit
GTGCCAGCAGCCGCGGTAATACCGAGGGTGCAAGCGTTAATCGGAATTAC60.5504587155963303No Hit
GTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTGTCCGGATTTAT60.5504587155963303No Hit
GTGCCAGCAGCCGCGGTAATACGGAGGGAGCTAGCGTTGTTCGGAATTAC50.45871559633027525No Hit
GTGCCAGCCGCCGCGGTAATACGGAGGGGGCTAGCGTTGTTCGGAATTAC50.45871559633027525No Hit
GTGTCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATCAC50.45871559633027525No Hit
GTGTCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATCAC50.45871559633027525No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGGGCTAGCGTTGTTCGGAATTAC40.3669724770642202No Hit
GTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGAATTAT40.3669724770642202No Hit
GTGTCAGCCGCCGCGGTAATACGGAGGGGGCTAGCGTTGTTCGGAATTAC40.3669724770642202No Hit
GTGCCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATTAC40.3669724770642202No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCGGATTCAC40.3669724770642202No Hit
GTGCCAGCCGCCGCGGTAATACAGAGGGTGCGAGCGTTGTCCGGAATTAC40.3669724770642202No Hit
GTGCCAGCAGCCGCGGTAATACGGAGGGGGCTAGCGTTGTTCGGAATTAC40.3669724770642202No Hit
GTGTCAGCCGCCGCGGTAATACGTAGGGTCCAAGCGTTAATCGGAATTAC40.3669724770642202No Hit
GTGCCAGCAGCCGCGGTAGTCCCAAGCCAAACCTAGATCGGAAGAGCGTC40.3669724770642202No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTGTCCGGATTTAT40.3669724770642202No Hit
GTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATTAC40.3669724770642202No Hit
GTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATCAC40.3669724770642202No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATCAC30.27522935779816515No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATTAC30.27522935779816515No Hit
GTGCCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATTAC30.27522935779816515No Hit
GTGTCAGCAGCCGCGGTAGTCCCAAGCCAAACCTAGATCGGACGAGCGTC30.27522935779816515No Hit
GTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCGGATTCAC30.27522935779816515No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC30.27522935779816515No Hit
GTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGAATTAT30.27522935779816515No Hit
GTGTCAGCCGCCGCGGTAGTCCCAAGCCACACCTAGATCGGAAGAGCGTC30.27522935779816515No Hit
GTGCCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCGGATTCAC30.27522935779816515No Hit
GTGCCAGCCGCCGCGGTAATACGAAGGTGGCAAGCGTTGTTCGGATTTAC30.27522935779816515No Hit
GTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC30.27522935779816515No Hit
GTGCCAGAAACCCCGGTAGTCCCAAGCCAAACCTAGATCGGAAGAGCGTC30.27522935779816515No Hit
GTGTCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCGGATTCAC30.27522935779816515No Hit
GTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTGTCCGGATTTAT20.1834862385321101No Hit
GTGTCAGCCGCCGCGGTAATACGTAGGGCGCAAGCGTTATCCGGAATTAT20.1834862385321101No Hit
GTGTCAGCAGCCGCGGTAATCCCAAGCCAAACCTAGATCGGAAGAGCGTC20.1834862385321101No Hit
GTGTCAGCAGCCGCGGTAATACCGAGGGTGCGAGCGTTGTCCGGAATTAC20.1834862385321101No Hit
GTGCCAGCCGCCGCGGTAAGACGAACCGTGCGAACGTTATTCGGAATCAC20.1834862385321101No Hit
GTGCCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTGTCCGGATTTAT20.1834862385321101No Hit
GTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGAATTAT20.1834862385321101No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGCGCAAGCGTTATCCGGAATTAT20.1834862385321101No Hit
GTGCCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTAC20.1834862385321101No Hit
GTGTCAGCAGCCGCGGTAGTCCCAAGCCAAACCTAGATCGGAAGAGCGAC20.1834862385321101No Hit
GTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC20.1834862385321101No Hit
GTGCCAGCAGCCGCGGTAATACGTAGGGTCCAAGCGTTAATCGGAATTAC20.1834862385321101No Hit
GTGTCAGCAGCCGCGGTAGTCCCAAGCCACACCTAGATCGGAAGAGCGTC20.1834862385321101No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGTGGCAAGCGTTGTTCGGATTTAC20.1834862385321101No Hit
GTGTCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATTAC20.1834862385321101No Hit
GTGTCAGCAGCCGCGGTAGTCCCAAGCCAAACCTAGATCGGCAGAGCGTC20.1834862385321101No Hit
GTGTCAGCAGCCGCGGTAATACGCAGGGGGCTAGCGTTGCTCGGAATCAC20.1834862385321101No Hit
GTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTGTCCGGAATTAC20.1834862385321101No Hit
GTGTCAGCCGCCGCGGTAAGACGAAGGATGCAAGCGTTATCCGGATTCAT20.1834862385321101No Hit
GTGTCAGCCGCCGCGGTAAGACGTAGGATGCGAGCGTTGTCCGGATTTAT20.1834862385321101No Hit
GTGCCAGCCGCCGCGGTAATACGTAGGGTCCAAGCGTTAATCGGAATTAC20.1834862385321101No Hit
GTGTCAGCCGCCGCGGTAATACAGAGGGTGCGAGCGTTGTCCGGAATTAC20.1834862385321101No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)