FastQCFastQC Report
Tue 7 May 2024
EGAF00004969581

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969581
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1090
Total Bases260.5 kbp
Sequences flagged as poor quality0
Sequence length239
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACCGCGGCTGCTGACACGAAACTCCACCAAGATCGGAAGAGCACA867.889908256880735No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA413.761467889908257No Hit
GGACTACCGGGGTTTCTGACACGAAACTCCACCAAGATCGGAAGAGCACA353.211009174311927No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA312.8440366972477067No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA312.8440366972477067No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA312.8440366972477067No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA292.6605504587155964No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA292.6605504587155964No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA272.4770642201834865No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA262.385321100917431No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA252.293577981651376No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA242.2018348623853212No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA232.1100917431192663No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA222.0183486238532113No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA211.926605504587156No Hit
GGACTACCGCGGCGGCTGACACGAAACTCCACCAAGATCGGAAGAGCACA201.834862385321101No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA191.743119266055046No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA181.651376146788991No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA171.5596330275229358No Hit
GGACTACGCGGCTGCTGACACGAAACTCCACCAAGATCGGAAGAGCACAC161.4678899082568808No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA161.4678899082568808No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA161.4678899082568808No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA161.4678899082568808No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA161.4678899082568808No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA141.2844036697247707No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA141.2844036697247707No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA121.1009174311926606No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA111.0091743119266057No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA111.0091743119266057No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA111.0091743119266057No Hit
GGACTACCCGGCTGCTGACACGAAACTCCACCAAGATCGGAAGAGCACAC80.7339449541284404No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA80.7339449541284404No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA60.5504587155963303No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA60.5504587155963303No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA50.45871559633027525No Hit
GGACTACCGCGGCTGCTGGCACGAAACTCCACCAAGATCGGAAGAGCACA50.45871559633027525No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA40.3669724770642202No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA40.3669724770642202No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA40.3669724770642202No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACACTTTCGTGCATCA40.3669724770642202No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA40.3669724770642202No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA40.3669724770642202No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA40.3669724770642202No Hit
GGACTACCGGGGTTTCTGGCACGAAACTCCACCAAGATCGGAAGAGCACA40.3669724770642202No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA40.3669724770642202No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA40.3669724770642202No Hit
GGACTACCGGGGTTTCTGACACGCAACTCCACCAAGATCGGAAGAGCACA30.27522935779816515No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA30.27522935779816515No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA30.27522935779816515No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA30.27522935779816515No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA30.27522935779816515No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCA30.27522935779816515No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA30.27522935779816515No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTGTCGCGCCTCA30.27522935779816515No Hit
GGACTACCAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGTGCCTCA30.27522935779816515No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA30.27522935779816515No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA30.27522935779816515No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA30.27522935779816515No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA30.27522935779816515No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA30.27522935779816515No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA30.27522935779816515No Hit
GGACTACGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCAG20.1834862385321101No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCA20.1834862385321101No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGTGCCTCA20.1834862385321101No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCA20.1834862385321101No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA20.1834862385321101No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTGTCGCGCCTCA20.1834862385321101No Hit
GGACTACAAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGTGCCTCA20.1834862385321101No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA20.1834862385321101No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA20.1834862385321101No Hit
GGACTACCGCGGCTGCTGACACGACACTCCACCAAGATCGGAAGAGCACA20.1834862385321101No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA20.1834862385321101No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA20.1834862385321101No Hit
GGACTACGCGGGTTTCTAATCCTGTTCGCTCCCCATGCTTTCGCTCCTCA20.1834862385321101No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTGTCGCGCCTCA20.1834862385321101No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCA20.1834862385321101No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA20.1834862385321101No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCA20.1834862385321101No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTGTCGCGCCTCA20.1834862385321101No Hit
GGATTACCGCGGCTGCTGACACGAAACTCCACCAAGATCGGAAGAGCACA20.1834862385321101No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA20.1834862385321101No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCA20.1834862385321101No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTGTCGCGCCTCA20.1834862385321101No Hit
GGACTACGCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCGCTACA20.1834862385321101No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA20.1834862385321101No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA20.1834862385321101No Hit
GGACTACCGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGTGCCTCA20.1834862385321101No Hit
GGACTACTGGGGTATCTAATCCTATTCGAGACCCATGCCTTCGTCCCTCA20.1834862385321101No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA20.1834862385321101No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA20.1834862385321101No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA20.1834862385321101No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA20.1834862385321101No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA20.1834862385321101No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA20.1834862385321101No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA20.1834862385321101No Hit
GGACTACGCGGCTGCTGACACGACACTCCACCAAGATCGGAAGAGCACAC20.1834862385321101No Hit
GGACTACGCGGCTGCTGACACGAAACTCCACCAAGCTCGGAAGAGCACAC20.1834862385321101No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)