FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004969582

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969582
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences431
Sequences flagged as poor quality0
Sequence length239
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC9522.041763341067284No Hit
GTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC7016.241299303944317No Hit
GTGTCAGCCGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC6414.849187935034802No Hit
GTGCCAGCCGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC5412.529002320185615No Hit
GTGTCAGCAGCCGCGGTAATACCGAGGGTGCAAGCGTTAATCGGAATTAC143.248259860788863No Hit
GTGCCAGCAGCCGCGGTAATACCGAGGGTGCAAGCGTTAATCGGAATTAC92.088167053364269No Hit
GTGTCAGCCGCCGCGGTAATACCGAGGGTGCAAGCGTTAATCGGAATTAC71.6241299303944314No Hit
GTGCCAGCCGCCGCGGTAATACCGAGGGTGCAAGCGTTAATCGGAATTAC71.6241299303944314No Hit
GTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC61.3921113689095126No Hit
GTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTAC51.160092807424594No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTGTCCGGATTTAT51.160092807424594No Hit
GTGTCAGCCGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC40.9280742459396751No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC40.9280742459396751No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATGAC30.6960556844547563No Hit
GTGCCAGCAGCCGCGGTAATACGGAGGGAGCTAGCGTTGTTCGGAATTAC30.6960556844547563No Hit
GTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC30.6960556844547563No Hit
GTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATGAC30.6960556844547563No Hit
GTGTCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATGAC20.46403712296983757No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC20.46403712296983757No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGAGCTAGCGTTGTTCGGAATTAC20.46403712296983757No Hit
GTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC20.46403712296983757No Hit
GTGCCAGCCGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC20.46403712296983757No Hit
GTGTCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTAC20.46403712296983757No Hit
GTGCCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTGTCCGGATTTAT20.46403712296983757No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATCAC20.46403712296983757No Hit
GTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATCAC20.46403712296983757No Hit
GCGTCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC10.23201856148491878No Hit
GTGCCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTAC10.23201856148491878No Hit
GTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCAGAATGAC10.23201856148491878No Hit
GTGTCAGCAGCCGCGGTAGTACAGAGGGTGCAAGCGTTAATCGGAATTAC10.23201856148491878No Hit
GTGTCAGCAGCCGCGGTAATACATAGGTCGCAAGCGTTATCCGGAATTAT10.23201856148491878No Hit
GTGCCAGCCGCCGCGGTAATACAGAGGGTGCAGGCGTTAATCGGAATTAC10.23201856148491878No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTCAATCGGAATTAC10.23201856148491878No Hit
GTGTCAGCCGCCGCGGTAATACAGAGGGTGCAAGCGTTAGTCGGAATTAC10.23201856148491878No Hit
GTGTCAGCAGACGCGTTAATATAGAGGGTGCAAGCGTTAATAGGAATTAT10.23201856148491878No Hit
GTGTCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGATTTAC10.23201856148491878No Hit
GTGTCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATCAC10.23201856148491878No Hit
GTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTGTCCGGATTTAT10.23201856148491878No Hit
GTGCCAGCCGCCGCGGTAATACGTAGGGTGCAAGCGTTGTCCGGAATTAC10.23201856148491878No Hit
GTGCAGCCGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTACT10.23201856148491878No Hit
GTGCCAGGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTA10.23201856148491878No Hit
GTGCCAGCCGCCGCGCTAATCTAGAGGGTGCGAGCGGTAATCGGACTTGC10.23201856148491878No Hit
CTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC10.23201856148491878No Hit
GTGTCAGCAGCCGCGGTAATACCGAGGGTGCAGGCGTTAATCGGAATTAC10.23201856148491878No Hit
GTGCCAGCAGCCGCGGTAATACATAGGGTGCAAGCGTTAATCGGAATTAC10.23201856148491878No Hit
GTGTCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTGTCCGGATTTAT10.23201856148491878No Hit
GTGTCAGCCGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCAGAATTAC10.23201856148491878No Hit
GTGTCAGCCGCCGCGGTCATACCGAGGGTGCAAGCGTTAATCGGAATTAC10.23201856148491878No Hit
GTGTCAGCCGCCGCGGTAATACCGAGGGTGCAAGCGTTAATCGGAATGAC10.23201856148491878No Hit
GTGTCAGCCGCCGCGGTAATACAGAGGGCGCAAGCGTTAATCGGAATTAC10.23201856148491878No Hit
GTGTCAGCCGCCGCGGTAATACAGAGGGTGCAAACGTTAATCGGAATTAC10.23201856148491878No Hit
GTGTCAGCCGCCGCGGTAATACGTAGGGGGCTAGCGTTGCTCGGAATGAC10.23201856148491878No Hit
TTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTGTCCGGAATTAC10.23201856148491878No Hit
GGTCAGCCGCCGCGGTAATACGGAGGGAGCTAGCGTTGTTCGGAATTACT10.23201856148491878No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTGTCCGGAATTAT10.23201856148491878No Hit
GTGCCAGCCGCCGCGGTATCATTATTAGATACCCGAGTAGTCCCGATTAT10.23201856148491878No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTGTTCGGAATTAC10.23201856148491878No Hit
GTGTTAGCCGCCGCGGTAATACGAAGGGTGCAAGCGTTAATCGGAATTAC10.23201856148491878No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTAC10.23201856148491878No Hit
GTGCCAGCAGCCGCGGTAATACGGAGGGAGCTAGCGTTATTCGGAATTAC10.23201856148491878No Hit
GTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC10.23201856148491878No Hit
GCGTCCGCCGCCGCGCTAATACGTAGGGTGCAAGCGTTGTCCTGAATTAC10.23201856148491878No Hit
GTGTCAGCAGCTGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC10.23201856148491878No Hit
GTGTCAGCCAGCCGCGGTAATACAGAGGGGGCAAGCGTTAATCGGAATTA10.23201856148491878No Hit
GTGTCAGCCGCCGCGGTAATACGTAGGGTGCAAGCGTTGTCCGGAATTAT10.23201856148491878No Hit
GTGCCAGCCGCCGCGGTAATACAGAGACTGCAAGCGTTATTCGGATTCAC10.23201856148491878No Hit
GTGTCAGCAGCCGCGGTAAGATCGGAAGATTAGAAACCCGCGTAGTCCCG10.23201856148491878No Hit
GTGCCAGCCGCCGCGGTAATACGGAGGGAGCTAGCGTTGTTCGGAATTAC10.23201856148491878No Hit
GTGCCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATCAC10.23201856148491878No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATGAC10.23201856148491878No Hit
GTGTCAGCAGCCGCGGTAATACATAGGGTGCAAGCGTTAATCGGAATTAC10.23201856148491878No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTAATCGGAATTAC10.23201856148491878No Hit
GTGTCAGCAGCCGCGGTAATACCGAGGGTACAAGCGTTAATCGGAATTAC10.23201856148491878No Hit
GTGTCAGCCGCCGCGGTAATACGCAGGGGGCTAGCGTTGCTCGGAATGAC10.23201856148491878No Hit
GTGTCAGCCGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATGAC10.23201856148491878No Hit
GTGTCAGCCGCCGCGGTAATACAGAGGGTTCAAGCGTTAATCGGAATTAC10.23201856148491878No Hit
GCGTCAGCCGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC10.23201856148491878No Hit
GTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATGAC10.23201856148491878No Hit
GTGCCAGCAGCCGCGGTAGTCCCGATTATGGCACAGATCGGAAGAGCGTC10.23201856148491878No Hit
GTGCCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATGAC10.23201856148491878No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTGTCCGGAATTAC10.23201856148491878No Hit
GTGCCAGCAGCCGCGGTAAACGGATTAGAAACCCTTGTAGTCCCGATTAT10.23201856148491878No Hit
GTGTCAGCAGCCGCGTTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC10.23201856148491878No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)