FastQCFastQC Report
Wed 8 May 2024
EGAF00004969597

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969597
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36271
Total Bases8.6 Mbp
Sequences flagged as poor quality0
Sequence length239
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACTAGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA18585.122549695348901No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA16314.496705356896694No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA14814.083151829285104No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA13123.617214854842712No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA12753.5152049846985194No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA12693.498662843594056No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA12123.3415125031016513No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA10893.002398610460147No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA10812.9803424223208625No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA10802.9775853988034515No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA10742.961043257698988No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA9902.7294532822364976No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA9112.5116484243610597No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA8632.379311295525351No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA8412.3186567781423175No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA8212.263516307794106No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA7982.2001047668936615No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA7442.051225496953489No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA7251.9988420501226876No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA6881.8968321799784953No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA5811.6018306636155606No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA5711.5742604284414548No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA5521.5218769816106532No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA3580.987014419232996No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2540.7002839734222933No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2510.6920129028700615No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2000.5514047034821207No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1900.5238344683080147No Hit
GGACTACTAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1810.49902125665131924No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1810.49902125665131924No Hit
GGACTACACGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1680.4631799509249814No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1660.4576659038901602No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1660.4576659038901602No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1560.4300956687160542No Hit
GGACTACTCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1510.41631055112900117No Hit
GGACTACTGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1450.3997684100245375No Hit
GGACTACAAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1400.3859832924374845No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1390.3832262689200739No Hit
GGACTACCAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1260.347384963193736No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1200.3308428220892724No Hit
GGACTACAGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1150.31705770450221943No Hit
GGACTACGAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1150.31705770450221943No Hit
GGACTACACGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1110.306029610432577No Hit
GGACTACGGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA1030.28397342229329214No Hit
GGACTACCCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA920.2536461636017755No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA910.2508891400843649No Hit
GGACTACTAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA790.21780485787543766No Hit
GGACTACCGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA780.2150478343580271No Hit
GGACTACTCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA710.19574866973615285No Hit
GGACTACAAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA670.18472057566651043No Hit
GGACTACACGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA640.17644950511427862No Hit
GGACTACAAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA600.1654214110446362No Hit
GGACTACTAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA590.1626643875272256No Hit
GGACTACGCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA580.159907364009815No Hit
GGACTACTGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA580.159907364009815No Hit
GGACTACAGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA570.1571503404924044No Hit
GGACTACGAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA540.1488792699401726No Hit
GGACTACGGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA540.1488792699401726No Hit
GGACTACTCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA460.12682308180088775No Hit
GGACTACCAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA460.12682308180088775No Hit
GGACTACTGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA460.12682308180088775No Hit
GGACTACCGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA460.12682308180088775No Hit
GGACTACGAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA430.11855201124865596No Hit
GGACTACACGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA430.11855201124865596No Hit
GGACTACTAGGGTTTCTACTCCTGTTTGCTACCCATGCTTTCGCTCCTCA390.10752391717901355No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)