FastQCFastQC Report
Tue 7 May 2024
EGAF00004969599

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969599
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82630
Total Bases19.7 Mbp
Sequences flagged as poor quality0
Sequence length239
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACGGGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA44335.364879583686313No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA39904.828754689580056No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA36194.379765218443665No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA35724.322885150671669No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA32643.9501391746339105No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA31953.8666343942877894No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA31793.847270966961152No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA31153.769817257654605No Hit
GGACTACGGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA30443.683892048892654No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA28983.5072007745370932No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA28273.421275565775142No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA27573.336560571221106No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA26213.171971438944693No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA25433.0775747307273384No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA23902.892411956916374No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA23872.88878131429263No Hit
GGACTACGAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA21972.6588406147888177No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA21912.651579329541329No Hit
GGACTACGCGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA21772.6346363306305216No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA20312.4579450562749607No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA20262.4518939852353867No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA20112.4337407721166646No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA18672.2594699261769335No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCA17472.1142442212271573No Hit
GGACTACGGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA5140.6220501028682076No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA5060.6123683892048892No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA4350.5264431804429384No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA4320.522812537819194No Hit
GGACTACGAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA4110.49739803945298317No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA4040.48892653999757957No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3840.46472225583928356No Hit
GGACTACGCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3720.45019968534430593No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3630.4393077574730727No Hit
GGACTACGGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3520.42599540118601No Hit
GGACTACTAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3460.41873411593852117No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3330.40300133123562876No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3280.3969502601960547No Hit
GGACTACACGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3250.39331961757231026No Hit
GGACTACTGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3080.37274597603775866No Hit
GGACTACTCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA3050.36911533341401426No Hit
GGACTACAAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2750.33280890717657025No Hit
GGACTACGCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2710.32796805034491106No Hit
GGACTACCAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2710.32796805034491106No Hit
GGACTACGAGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2670.3231271935132518No Hit
GGACTACCGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2550.30860462301827424No Hit
GGACTACAGGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2480.3001331235628706No Hit
GGACTACGGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA2360.285610553067893No Hit
GGACTACCCGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2320.2807696962362338No Hit
GGACTACTAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA2280.2759288394045746No Hit
GGACTACACGGGTATCTAATCCTGTTTGATCCCCACGCTTTCGCACATCA2260.273508410988745No Hit
GGACTACTCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA2070.2505143410383638No Hit
GGACTACTGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1950.2359917705433862No Hit
GGACTACGGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1870.22631005688006778No Hit
GGACTACGAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1830.2214692000484086No Hit
GGACTACAGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1820.22025898584049378No Hit
GGACTACACGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1770.21420791480091977No Hit
GGACTACAAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1730.20936705796926058No Hit
GGACTACGCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1660.20089555851385693No Hit
GGACTACCAGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1570.19000363064262374No Hit
GGACTACCGGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1490.18032191697930533No Hit
GGACTACCCGGGTTTCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1480.17911170277139055No Hit
GGACTACTCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1330.1609584896526685No Hit
GGACTACTAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1300.1573278470289241No Hit
GGACTACGAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1250.1512767759893501No Hit
GGACTACCAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1150.1391746339102021No Hit
GGACTACAAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1140.1379644197022873No Hit
GGACTACGCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1140.1379644197022873No Hit
GGACTACCGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1080.1307031344547985No Hit
GGACTACTGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1060.1282827060389689No Hit
GGACTACAGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA1000.12102142079148008No Hit
GGACTACACGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCA880.1064988502965025No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)