FastQCFastQC Report
Tue 28 Jun 2022
EGAF00004969612

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969612
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences118654967
Sequences flagged as poor quality0
Sequence length96
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT1503140.1266815910032658No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1220790.10288570557691025No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)