Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004969755 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16928704 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATGCCG | 12535 | 0.0 | 10.514537 | 94-95 |
TCGTATG | 17495 | 0.0 | 10.370529 | 94-95 |
CGTATGC | 15680 | 0.0 | 10.223021 | 94-95 |
CTCGTAT | 19570 | 0.0 | 9.525775 | 94-95 |
GTATGCC | 16510 | 0.0 | 8.817286 | 94-95 |
TCTCGTA | 21565 | 0.0 | 8.743646 | 94-95 |
ATGCCGT | 13190 | 0.0 | 8.390013 | 94-95 |
ATCTCGT | 24920 | 0.0 | 8.014371 | 94-95 |
GCCGTCT | 12455 | 0.0 | 7.9317884 | 94-95 |
TGCCGTC | 13905 | 0.0 | 7.6170244 | 94-95 |
CCGTCTT | 11460 | 0.0 | 7.5636206 | 94-95 |
CATCTCG | 30000 | 0.0 | 7.258879 | 94-95 |
ACGCCAA | 58185 | 0.0 | 6.346596 | 94-95 |
ACATCTC | 38380 | 0.0 | 6.280331 | 94-95 |
AGACATC | 41985 | 0.0 | 6.2784195 | 94-95 |
GACATCT | 40170 | 0.0 | 6.1600943 | 94-95 |
CGCCAAG | 56745 | 0.0 | 6.1268177 | 94-95 |
CACGCCA | 67115 | 0.0 | 5.955058 | 94-95 |
AAGACAT | 46000 | 0.0 | 5.9007864 | 94-95 |
AGTCACG | 75805 | 0.0 | 5.883276 | 94-95 |